| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5826 |
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| Symbol | |
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| ID | 5674149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7066441 |
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| End bp | 7067757 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641244676 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001510078 |
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| Protein GI | 158317570 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATATGG AAGAGGAGCG GCGATTCTCC GTGGCGGCAG CACGCGGGAA CTGGCCGGAC
GCGACCTCTC ACGTGGAAGG AGAGGTCCGT GAACTGATCC GGCGGCGTTC CCTCGACCCG
GAGCGGGAAC CCGTCCTCAT TCGTCAACTT GTGGACGCGG TTCTCGTCGA CTACGAGGAA
CGTGCGCTCA CCAGTGATCT CCCACCCGTC GCCGACCGGG ATGCGACCGC TCGTTCGGTT
TATGACGCCG TCGCCGGTTT CGGGCCGCTT CAACGCCATC TCGACGATCC GGCCGTGGAG
GAGATCTGGA TCAACGAGCC GGGCCGGGTG TTCGTCGCGC GGCACGGGCG CAGCGAGCTG
ACCACCACGA TTCTCACCCA GGACCAGGTG CAGGACCTGG TGGAACGCAT GTTGAAGTCG
TCCGGGCGCC GGGTCGACCT CTCCACCCCG TTCGTCGACG CCATGCTTCC CGATGGCTCC
CGCCTGCACG TCGTCATCCC GGACGTCACC CGGGTGCACT GGTCGGTGAA CATCCGGAAG
TTCGTTCTGT CCGCCGGCAG CCTCGACGAG CTCGTCGCCC TGGGGACGAT CACACCGAAC
GCCGCGATGT TCCTGGAGGC GTCGGTCATC TCCGGCCTCA ACGTCATCGT CGCCGGCGGC
ACCCAGGCCG GGAAGACGAC CATGCTCAAC TGCCTCGGCT CCGCCATCCC CGCCCGGGAA
CGGGTGATCA GCGTCGAGGA GGTCTTCGAG CTCCGGCTGC GCGCGCCCGA CTGGGTGGCC
ATGCAGACCC GGCAGGCGAA CCTGGAGGGC ACCGGGGAGA TCCGGCTGCG CCGGCTCATC
AAGGAGGCGC TGCGGATGCG CCCGGACCGG ATCCTGGTCG GCGAGGTGCG CCAGGAGGAG
GCGCTCGACC TGCTCATCGC CCTCAACTCC GGCCTGCCCG GAATGTGTAG CCTGCACGCC
AACTCCGCCC GCGAGGCGGT GACCAAGCTG TGCACCCTGC CGCTGCTGGC CGGCGAGAAC
GTCACCCACT CCTTCGTGGT CCCCACCGTC GCCTCCAGCG TGGACCTGGT CGTTCACCTG
TCGAAGGAGG CGGACGGTCG GCGGCGGGTC ACCGAGATCG CCGCGCTGCC GGGCCGCACC
GAGGGCGACA CGGTGGAGGT CGCCCAGATC TTCCGGACCC GCGGCAACAT GCTCGTGCGC
GCCGACGGGT TCCCGCCCCA TCCCGAGCGG TACCTGCGTG CCGGCTTCGA CCTGCCGGCG
CTGCTCGCTC CCAGCGAGCA CGAGCGGGCG TACGCGCAGA TCGCGGTCGA GCGCTGA
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| Protein sequence | MNMEEERRFS VAAARGNWPD ATSHVEGEVR ELIRRRSLDP EREPVLIRQL VDAVLVDYEE
RALTSDLPPV ADRDATARSV YDAVAGFGPL QRHLDDPAVE EIWINEPGRV FVARHGRSEL
TTTILTQDQV QDLVERMLKS SGRRVDLSTP FVDAMLPDGS RLHVVIPDVT RVHWSVNIRK
FVLSAGSLDE LVALGTITPN AAMFLEASVI SGLNVIVAGG TQAGKTTMLN CLGSAIPARE
RVISVEEVFE LRLRAPDWVA MQTRQANLEG TGEIRLRRLI KEALRMRPDR ILVGEVRQEE
ALDLLIALNS GLPGMCSLHA NSAREAVTKL CTLPLLAGEN VTHSFVVPTV ASSVDLVVHL
SKEADGRRRV TEIAALPGRT EGDTVEVAQI FRTRGNMLVR ADGFPPHPER YLRAGFDLPA
LLAPSEHERA YAQIAVER
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