| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5825 |
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| Symbol | |
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| ID | 5674148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7065581 |
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| End bp | 7066441 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641244675 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001510077 |
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| Protein GI | 158317569 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.906484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCATCT TCCTCGGCCT GCTGTTCGGC CTCGGCCTCT TCCTGATCGT GGCGAGTGGG
CGTCCGCGGG CCGGTGGCGC GCGCGCCGAG GCCTCCTGGG CCCGCAACCT GCGCGAGACA
CTGGCCCAGG CCGGGATCCG CGGCGTCACC GCGCACCAGT TCGTCCTCAT CAGCGCCGCC
CTGGGGCTGG TGGCCGGCCT GGTCATCCTG GTCTTCTCCG GCACGTTCTC GCTGGCCGTG
GCCTTCGCCG CCTTCGCCTC GGTGCTGCCG CGCCAGCTCG TGCTGCGCCG GCGCCGGGCC
CGCATCCACG ACCTGCGCGA GCTGTGGCCG GACGTCGTCG ACAACCTCGC CAGCGCCGTG
CGCGCCGGCA TGTCGCTGCC CGAAGGGCTG GCCGCGGTCG GCGTCCGCGG GCCGGCGCCG
CTACGCCCGG CGTTCACCCG GTTCGGTGAG GACTACCGCG CGACCGGCTC GTTCTCGACC
TGCCTCGACC GGCTTGCCGA CGATCTCGCC GACCCCGTCG CGGACCGCAT CATCGAGTCG
CTGCGGATGG CCCGAGAGGT CGGCGGCACC GACCTCGGCC GCCTGCTGCG CACCCTGTCG
GCCTTCCTGC GCGAGGACGC CCGCACCCGC GCGGAGCTGG AGACCCGCCA GGCCTGGACG
GTCAACGCCG CCCGCCTCGC GATGGCGGCG CCGTGGATCG TCCTGCTGCT GCTCGCCAGC
CGCGGCGAGA ACATCCAGGC CTACGACAGC CCCACCGGGG TGCTGGTGCT CCTCGGTGGC
GCCGGGGTCT CCGTCCTGGC GTACGTGCTC ATGAAGCGGA TCGGGCGTCT GCCCGAGGAG
GGACGGGTGC TGCGGCCATG A
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| Protein sequence | MGIFLGLLFG LGLFLIVASG RPRAGGARAE ASWARNLRET LAQAGIRGVT AHQFVLISAA
LGLVAGLVIL VFSGTFSLAV AFAAFASVLP RQLVLRRRRA RIHDLRELWP DVVDNLASAV
RAGMSLPEGL AAVGVRGPAP LRPAFTRFGE DYRATGSFST CLDRLADDLA DPVADRIIES
LRMAREVGGT DLGRLLRTLS AFLREDARTR AELETRQAWT VNAARLAMAA PWIVLLLLAS
RGENIQAYDS PTGVLVLLGG AGVSVLAYVL MKRIGRLPEE GRVLRP
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