Gene Franean1_5820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5820 
Symbol 
ID5674143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7062768 
End bp7063082 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content68% 
IMG OID641244670 
ProductXRE family transcriptional regulator 
Protein accessionYP_001510072 
Protein GI158317564 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.790408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGT TCCACGACTG GGACGACATC CGCGCCGACC TGCATGACGG CGACGACGAG 
GCGCTGGCAG CCGAGCGCGG GCGCACCGAG GCCTGGATCA GCGCGTTCCA TCTGGCCGAG
GAACGCAAGC GGCTGGGGTT GACCCAGCGT GAGGTGGCCG AGCTGATGGG CGTCTCTCCG
GGCCGGGTGA GCCAGATCGA GAACGGCGAC CTCGACGCGA ACGAGGTCGC GACGTTGAGC
CGGTACGCCC GGGCGCTCGG TGCCCGCTTG CGGATCATCT TCGACTACGG TAACGATCTC
CGCCAGATCG CCTGA
 
Protein sequence
MTEFHDWDDI RADLHDGDDE ALAAERGRTE AWISAFHLAE ERKRLGLTQR EVAELMGVSP 
GRVSQIENGD LDANEVATLS RYARALGARL RIIFDYGNDL RQIA