| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5796 |
|---|
| Symbol | |
|---|
| ID | 5674119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 7038167 |
|---|
| End bp | 7038982 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641244646 |
|---|
| Product | uroporphyrin-III C-methyltransferase |
|---|
| Protein accession | YP_001510048 |
|---|
| Protein GI | 158317540 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0007] Uroporphyrinogen-III methylase |
|---|
| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.991425 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.969674 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGTGG ACGCGCAGGC GGGATGGGTA GCGCTTGTCG GAGGCGGGCC GGGCCGGGGT
GATCTGATCA CGCTGCGCGG CCTGCGCCTG CTGCGGCGCG CCGACGTGGT CGTCGTCGAC
CGCCTCGCCC CCCGTGAGCT GCTGGACGAG CTGCGGCCGG ACGTCGAGAT CGTCGACGCC
GGCAAGGCAC CGCACGGCCA CAACCTCACC CAGGACGAGA TCAACGCCCT CATCGTGGAA
CGGGCGCTGC GTGGCCTCGG GGTCGTCCGT CTCAAGGGCG GCGACCCGTT CGTCTTCGGC
CGGGGCGGTG AGGAGGCGCT GGCCTGCACC GCCGCCGGCG TGCCGTGCGA GGTGGTGCCC
GGGGTGACCA GCGCGGTAGC CGTGCCCGCG ATGGCCGGGA TCCCGGTCAC CCACCGCGGC
ATCACCCAGG ACGTGGCGAT CGTCAGCGGC CACCTCGACC CGTCCCACCC CGGTTCGACG
GCGGACTGGG ACGCGCTCGC GACCGGTCCC GGCACCGTGG TCGTGCTCAT GGGGGTCGCG
GCGCTGCCCC GGATCAGCGC TGAGCTGATC AAACGCGGGC GGTCACCGCG GACCCCGACC
GCGGTGATCC ACGCCGGTGG CACGGAGCAC GAACGGCTGG TGACCGGCCC GCTGGGCGAG
ATCACCCGGC TGGCGCTGGC GGCGGACGTC TCCTCGCCGG CCGTGATCGT CATCGGCGAG
GTCGTCGCCC TGCGCGACCA GCTCGCCGTG GGTCGCATCC CGGATCGCGC GGACGACGGC
CCTGCCCGGG ACGACGGCCC CGGTCAGGTG GGGTGA
|
|---|
| Protein sequence | MAVDAQAGWV ALVGGGPGRG DLITLRGLRL LRRADVVVVD RLAPRELLDE LRPDVEIVDA
GKAPHGHNLT QDEINALIVE RALRGLGVVR LKGGDPFVFG RGGEEALACT AAGVPCEVVP
GVTSAVAVPA MAGIPVTHRG ITQDVAIVSG HLDPSHPGST ADWDALATGP GTVVVLMGVA
ALPRISAELI KRGRSPRTPT AVIHAGGTEH ERLVTGPLGE ITRLALAADV SSPAVIVIGE
VVALRDQLAV GRIPDRADDG PARDDGPGQV G
|
|---|
| |