| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5728 |
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| Symbol | |
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| ID | 5674054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6958064 |
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| End bp | 6960613 |
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| Gene Length | 2550 bp |
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| Protein Length | 849 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641244581 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_001509984 |
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| Protein GI | 158317476 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.885214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGGAGT TCGACTCGGC GAGCGGGCCG AGTCGAGGCG TTCCGATGAT TTGGGGTGGT
GTACCCCAGC GGAACAAGAA CTTCACCGGG CGAGAAAGCC AGCTCGCCGA GCTCCGTCGC
CGTGTCTCCT CCGAGCAGAC CGACGTCACC GCCGTCCTGC CGCACGCCCT CCAGGGCCTG
GGTGGTGTCG GGAAAACTCA CCTCGCCATC GAGTACGCGT ACCGGTACCA GTCCCACTAC
GACCTGATCT GGTGGATCCC CGCCGACCAG CCGGCGCTCG TCCGCTCCAA CCTGGCCGCG
CTGGCGCCTC GTCTCGGCCT GTCCGAGGGC GGCCTGCTGC GGGTCGAGGA CTCGGTTGCC
GCCGTTCTCG ACGCCCTGCG CCGGGGCGAG CCCTACCACC GATGGTTGTT GATCTTCGAC
AACGCCGACC AGCCCGAGCT GATCCGCAGC CTGATGCCCC ACGGCCCCGG CCATGTACTC
GTAACTTCGC GTAACCGGCG ATGGCAGAGC ATCGTCGACA CGATCGAGGT CGACGTCTTC
GCTCGCCGCG AGAGCCTGGA GTTCCTCGAT CGTCGGGTTC CCGGCATCGC GGAGTTCGAC
GCCAACCGGC TGGCCGAGGC GCTCGGGGAC CTGCCGCTGG CGCTGGAGCA GGCCGGGGCG
CTGCAGTTCG AAACCGGGAT GGGCGTCGAG GAGTACCTGG ACCTGCTCGG GGAGGCGTCG
AGTCGGCTGC TGGCGGAGAA CCCGCCGTCC GACTACTCGA AGCCGGTGGC GGCCGCGTGG
AGCCTGTCGG TGACCCGGCT GCGCGATCAG GCGCCCTTCG CGCTCGAACT GCTGCGGCGG
TGTGCCTTCT TCGGCCCGGA GCCGATCTCG CTGGAGATGC TCGACCGCGG CAAGTACACC
CTGAGCTCCG ACTTCGGCCG GTCGATGCAG GACCGGTTGC TGGTGAGCCG CGCCATGCGC
GAACTCGGCC GCTATGCGCT AGCGAAGATC GACACCAGTC GCAAGACGGT GCAGGTGCAC
CGCCTGGTCC AGATGCTCAT CCGCGAAGAG CTCCCGGCCG AGGAGCAGGC CCGCATGCGG
GACGAAGTCC ACGCACTGCT GGTGGCCGCC GACCCGGGGA ACTCCGAGAC CCAGAACCGG
GTCGAGTTCG AGAACCTGCT CCCACACATC GTGCCCTCCG GTGTCTTCGA GTCCACCGAG
GTCCCGGCCC GTCAGCTCAT CGAGCACATC ATCGGGTACC TGTACAACGT CGGAGACTTC
ACCACGGGCC TGAACGAGGC GGACCGCGCA TTGCGGCAGT GGGAGAAGGC CTCCGGCGAG
CGCGATCCGG ACGTGCTCGT GCTGAAGGGG ATCAAGGCGA ACATCCTCTG GTCGCTAGGT
AGATCTCAGG ACGCATATGA CCTGCGACGG CCCACCCTGG AGGCGATCAC TGAGGTCCTC
GGGCCGGACC ACGAGGAGAC TCTGATCATC CTCAACGGCC ATGGCGCCGA CCTGCGTTCC
CGCGGCGAGT TCCGGGCGGC GCTCGTGCTC GACGAGGACG CCCTTCCCCG ACACGAAAGA
GTTTTCGGTA CATATACTCA CGAAACCCTT CTTTGTGTCA ACAATCTCGC ATTGGACTAC
AGCCTCAACA GCTCCTATGA GCTTGCGCTG CGGCGGGATC AGGAGAACCT CGCCAACAGG
CGGGACCTGT CGGGCGGTGA TACGGATCCT TGGGTTGCGC TCTCGTTGGC TGCTGTCGCC
CGTGACCTGC GGCAGGCGGG CCATTACCTG AAAGCCCGGG ATGCGGCGGA ACACGCCTAC
CGGGTTTATG AAGATCTCGT CGACCGTGGG CGACTTACCG CCGATCATCC GTACGTTCTC
GCGCAGGCGA AGGATCTCTC GGTCGCCCGG CGGAAGGCCG GGCTCTTCCC CGAGGCCCTG
GTGCTCGCCG AGCAGGTCTA CGGTCGTTAC ACGGAGAGTC GGCAGTTCGA AAAAGAACAT
CCCGAAGCCC TTGCCGCCGC GATCAATTTG GGGAATGCGC AGCGGGTCGC GGGTGATCCG
AATGACGCGG CGGAGCGTAT CGAGAAGACC GTAAATCGGT ATCGTGAAGC TCTTGGTGCC
GACCATCCGT ATACCTACGG TTGTTATCTG AACCTAGCGC TGGTCCATCG TCAGCTTGGC
CGGGTCGACG AGGCCGAGCG CCTGCTCAAG GACGCGCTCG CGGGTCTGGA AGGCAGGCTC
GGCCCGGACC ACCACTTCAC GTTGACCTGC CGGGCGAACC TGGCCACCGC TCGATCCGCG
CAGGGTGCGG TCAGCGAGGC CCTGGAGACC GGGGAACAGA CCCTGAACTC GTTCCGTGAC
CTGCTGGGTC CTGATCACCC GCACACCCTG GTCTGCGCGA CCAATGTCGC GTTGGACCTG
GCCCAGCTCG GCCGGAACGA CGAGGCCAAG AACCTCTCCG CCGACACCGT CACCCGTTAC
CGCCGGGTTC TGGGCCCGGA GCATCCCGAC GTGCGGGCCG GTGAGCGCGG CGAGCGGCTC
GACTTCGACT TCGAGCCGCC GCCGCTGTAG
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| Protein sequence | MVEFDSASGP SRGVPMIWGG VPQRNKNFTG RESQLAELRR RVSSEQTDVT AVLPHALQGL
GGVGKTHLAI EYAYRYQSHY DLIWWIPADQ PALVRSNLAA LAPRLGLSEG GLLRVEDSVA
AVLDALRRGE PYHRWLLIFD NADQPELIRS LMPHGPGHVL VTSRNRRWQS IVDTIEVDVF
ARRESLEFLD RRVPGIAEFD ANRLAEALGD LPLALEQAGA LQFETGMGVE EYLDLLGEAS
SRLLAENPPS DYSKPVAAAW SLSVTRLRDQ APFALELLRR CAFFGPEPIS LEMLDRGKYT
LSSDFGRSMQ DRLLVSRAMR ELGRYALAKI DTSRKTVQVH RLVQMLIREE LPAEEQARMR
DEVHALLVAA DPGNSETQNR VEFENLLPHI VPSGVFESTE VPARQLIEHI IGYLYNVGDF
TTGLNEADRA LRQWEKASGE RDPDVLVLKG IKANILWSLG RSQDAYDLRR PTLEAITEVL
GPDHEETLII LNGHGADLRS RGEFRAALVL DEDALPRHER VFGTYTHETL LCVNNLALDY
SLNSSYELAL RRDQENLANR RDLSGGDTDP WVALSLAAVA RDLRQAGHYL KARDAAEHAY
RVYEDLVDRG RLTADHPYVL AQAKDLSVAR RKAGLFPEAL VLAEQVYGRY TESRQFEKEH
PEALAAAINL GNAQRVAGDP NDAAERIEKT VNRYREALGA DHPYTYGCYL NLALVHRQLG
RVDEAERLLK DALAGLEGRL GPDHHFTLTC RANLATARSA QGAVSEALET GEQTLNSFRD
LLGPDHPHTL VCATNVALDL AQLGRNDEAK NLSADTVTRY RRVLGPEHPD VRAGERGERL
DFDFEPPPL
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