| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5690 |
|---|
| Symbol | |
|---|
| ID | 5674016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 6908747 |
|---|
| End bp | 6909487 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641244543 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001509946 |
|---|
| Protein GI | 158317438 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCGCG GTCGCGTCGT GGCCCTCGAC GACGTCAACC TCGCGACGGC GGAGGGCTCG
TTCCTGACCC TGATCGGCCC CTCGGGCTGC GGCAAGTCCA CCGTGCTGCG GATCCTGGCG
GACCTGGACG CCCCGACGGC CGGGACGGTG CTGGTGCGCG GCGAGGCGCC GTCGGTGGCC
CGCCGGGCGC ACCACCTCGG CATCGCCTTC CAGGACGCCG CTCTGCTGCC CTGGCGGTCG
GTCGAGGCGA ACATCCGGCT GCCGCTTGAG GTCAGCGGTC TGAAGGCCGA ACGCAAGGTC
ATCAGTGACC TGATCGCTCT CGTCGGGCTG ACCGGCTTCG AGCGGGCCCG GCCCGCGCAG
CTCTCCGGCG GCATGCGCCA GCGGGTCGCG ATCGCCCGCG CCCTCGTCGT GCAGCCCAAG
GTGCTGCTGC TCGACGAGCC GTTCGGCGCC CTCGACGACA TGACCCGCCA GCGCCTGAAC
TTCGAGTTGC TGCGCATCTG GAGTGAACGC TCGACGACCA CCGTCCTGGT GACCCACTCG
ATCCCCGAGG CGGTCATCCT CTCCGACACC GTCGCGGTGA TGACCGCCCG CCCCGGGCGC
GTCGCGGCGC GCGTCGACAT CGACCTGCCG CGCCCGCGCA CCCCGGAGAT GCTGCGCACC
GCCCGGTTCC ACGAGCTGCA CGACGAGCTG TCCACGCTCC TGTTCGCCGG TACCGGCCCG
ACGGCAGGGG AGGCCGGATG A
|
|---|
| Protein sequence | MGRGRVVALD DVNLATAEGS FLTLIGPSGC GKSTVLRILA DLDAPTAGTV LVRGEAPSVA
RRAHHLGIAF QDAALLPWRS VEANIRLPLE VSGLKAERKV ISDLIALVGL TGFERARPAQ
LSGGMRQRVA IARALVVQPK VLLLDEPFGA LDDMTRQRLN FELLRIWSER STTTVLVTHS
IPEAVILSDT VAVMTARPGR VAARVDIDLP RPRTPEMLRT ARFHELHDEL STLLFAGTGP
TAGEAG
|
|---|
| |