| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5664 |
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| Symbol | |
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| ID | 5673991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 6875780 |
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| End bp | 6878005 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641244518 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001509921 |
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| Protein GI | 158317413 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.269421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.7047 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGTA TCGATCTTGC TCTCGCCGGC ATCTCCATCG GGGCCATCGC GGCCCTCTCC
GGCATCGGGC TGCTTGTCAC CTACCGCACC AACGGCGTTC TCAACCTCGC GCAGGGCGGA
ATCGCGACCC TGGTCGCGTA CGTGTTCCGC GAGATGGTCG TCGAGTGGGA CCTGCCGATC
TGGCTGGCCG CGGTGATCGC CCTCGGCATC CTCTCCCCCG GCATCGGGCT TCTACTCGAA
CGGCTCGTGT TCCGCCCGCT CGCCCGTCGA CGCGCCTCCG CCGCCGAGTC GCTGGTCGCG
AGCCTCGGCG TCCTGGTCCT CACGCTCGGC ATGACGGCCG GCATCTGGGG CCTGGGCTCC
CGCAGCGACG CGCCGAGTAT CTTCCCGAAC GAGTCGGTCA CGATCTTCGG TGACACCCGC
ATCGGCGTCG ACGCCCTGGC CGAGCTGGCC ATGGTCGTCG CGTTCTGCAT CGTGCTCGGG
CTCATCGCGG CGAAGACGAA GTTCGGCCGC CAGATCCGGG CCGTCGTCGA CGACCGCCAG
CTCGCCGAGC TCTCCGGCGT GCCCGCCGAC CGGGTCGCCG CGGCCGGGTG GGCGCTGGGC
ACCACGATGG CCGGCCTCAC CGGCATCCTG CTGGCGCCCC GGTTCCAGCT CAACCCGTAC
GGGCTGACGC TGCTCGTCCT GGAGACGTTC GCCGTCGTCG TGGCCGCCCG GCTGTCGAGC
ATGCCAGTGG CGGTGCTGAC CGCGCTGGGC ATCGCCGTCC TGCAGAGCGA GCTCAAGCAG
TTCACCCTCG AGGGCGACGC CGGCCAGATC CTCATCGTTC TGCAGTCCAA CCTGTTCATC
TTCGCGCTGC TGGTGCTGCT GCTCGTGGTA CCCAAGCTGC GCGAGCTGGG CAACGGCGAC
TCCGGCTCGA CCGGGAGCTT CTCCAGCCGG GGCGCTCCCC CCGCCGGCCC GGTCAGCCGG
CACGACGCCC GGCGCGACAT CCTCGGCAAG CTCGGCGGCG CCGCGCTGCT GCTGGCCCCG
CTGACCTTCG CCCCGGCCGA CCTGCGCTCG GCGTTCATGG TGCCCGCCCT GGCCCTGATC
TTCCTCTCGC TGGTGATCCT CACCGGCTAC AGCGGCCAGC TCTCCCTCGG CGTCGCCGGC
TACGCGGGCC TGGGCGCCCT GCTCACCCTC AAGCTCGCCA ACGGCGACCT GTTCGGCATC
CCGGCGATCC CCGGCATGTG GGCGATGTTC CTGGGCGCGC TGCTGGTCGC GCCGATCGGA
CTGATCACCG GGTGGCCGGC GATCCGCCGG CGCGGGCTGA CTCTCGCGCT GACGACCTTC
GCGGTCGGCG CGGTCGTGAG CCGCTTCGTC TTCGAGCAGC CGACCTTCGC GACCGGCCTG
TACGTCGACC CGCTGACGTT CTTCGGCTCC GAACTGACCG ACGAGGCCTT CTACATCTTC
GAGCTGGTCT GCCTGGCCAT CGGCCTGCTG GTTGTGCGCA ACCTGCACCA CGGCCGGCTC
GGCCGGGCCC TGCTCGCCGT CCGCGACCAC ACCGAGGGCG CCGCGGCGGT CGGGGTGGAC
GTCCGCAACC TCAAACTGCT CGCGTTCACC GTCTCCTCGG TCGTGGCCGG CCTCGGCGGC
GGGCTGCTGA CCTTCAGCTC CTCCTCGTTC TCGGCGGACG ACTTCGCGCC GTTGCAGAGC
CTGCTGTGGT TCACCGCCGT GATCGTCTTC GGTGCCGACA GCGCCGCCGG GGCGATCATC
GCGGCGGCGT TCATCGTCAC CATCGACGTG CTGGCCCCGG CCGGCTCGTC GATCCTCGCG
GTCGGCATCC TCGCCCTGGC GCTGGGCTGG ATGCCCGGCG GCCTCGCGTC CGCGGTCCGG
GCCGGCTTCG CGCTGGTCGC CCGCACGCTG GCCGACGAGT TCGTCCCCGC GCCGCGGCCC
ACCCGCCATG CCAGCGCCCG TCTCGCCGCG GGCGGCGCCG CGGGCCACGT GCCCGGTGTC
CCGGGCGCCG GCGGCGGAGC GGCTCTCGGC GAGCTGCGGA TCGTGCTGCC GCCGGGAGCA
CCGGCACCGA CCGCCTTCGG CGCGGCGCTG CTGAGCGCGG TCGCCGCACA CGCCGCCCGC
ACCGGGCTGA GCCTGGACGC GCTGCCGAGC GCCCGCACGG CGGCGGACGA CTCCACAGAC
GGCCGGGAGC TGGTCGGGCA CCGACCGCAC CTGCCCGGAT ACCCGGTCGA GAGAGGCGCG
TCATGA
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| Protein sequence | MTSIDLALAG ISIGAIAALS GIGLLVTYRT NGVLNLAQGG IATLVAYVFR EMVVEWDLPI
WLAAVIALGI LSPGIGLLLE RLVFRPLARR RASAAESLVA SLGVLVLTLG MTAGIWGLGS
RSDAPSIFPN ESVTIFGDTR IGVDALAELA MVVAFCIVLG LIAAKTKFGR QIRAVVDDRQ
LAELSGVPAD RVAAAGWALG TTMAGLTGIL LAPRFQLNPY GLTLLVLETF AVVVAARLSS
MPVAVLTALG IAVLQSELKQ FTLEGDAGQI LIVLQSNLFI FALLVLLLVV PKLRELGNGD
SGSTGSFSSR GAPPAGPVSR HDARRDILGK LGGAALLLAP LTFAPADLRS AFMVPALALI
FLSLVILTGY SGQLSLGVAG YAGLGALLTL KLANGDLFGI PAIPGMWAMF LGALLVAPIG
LITGWPAIRR RGLTLALTTF AVGAVVSRFV FEQPTFATGL YVDPLTFFGS ELTDEAFYIF
ELVCLAIGLL VVRNLHHGRL GRALLAVRDH TEGAAAVGVD VRNLKLLAFT VSSVVAGLGG
GLLTFSSSSF SADDFAPLQS LLWFTAVIVF GADSAAGAII AAAFIVTIDV LAPAGSSILA
VGILALALGW MPGGLASAVR AGFALVARTL ADEFVPAPRP TRHASARLAA GGAAGHVPGV
PGAGGGAALG ELRIVLPPGA PAPTAFGAAL LSAVAAHAAR TGLSLDALPS ARTAADDSTD
GRELVGHRPH LPGYPVERGA S
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