Gene Franean1_5625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5625 
Symbol 
ID5673952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6839940 
End bp6840737 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content72% 
IMG OID641244478 
Producthypothetical protein 
Protein accessionYP_001509882 
Protein GI158317374 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00104167 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGCGG CTTTGTCGCG CGGCTACGAA CGGGTGATCG TCGAGCCTGG GAAGCAGCCG 
TTGCTGGCGC TCCTCGTCGC GTTCATCCTC ACGTTCCTGT TCATCCGGCT GAGTGTGCGC
ATGATCCGTG CGGGCGTGCG CTGGTGGCCG GGCAACGTCG CGGTCGGCGG GGTGCACGTC
CACCACGCCA TCTTCGGCAT CGCCTTCGTG CTGCTCGCCG GGGTGGGCGC GTTCTCGCCC
GCGGGGGGGC GGTCGCCCTG GTGGGATCTG CTGGCGATTC TGTTCGGCGT GGGCGCGGCG
CTCATCCTCG ACGAGTTCGC GCTGGTACTG CGGCTGAAGG ACGTCTACTG GTCCGAACAG
GGCCGGATGT CGGTGGACGC GGTCATCCTG GGCGCGGCGT TCACGGCGCT GTTGATCGTC
GGCGCGACAC CACTGGGCGT GGACGGCCTC GACACCGGAG ACCACCTCGC GCTGTGGGAT
CTCATCGTCG TGCTCGGCAT CAACATCGTG GCGGTGAGCT GCAGCTTCCT CAAGGGCCGC
GTCGGCTTCG GCGTCGTCGG CCTGCTCATT CCGCTGGTCG CGGTGGTCGG GGCGGTCCGC
CTGGCGCGGC CCGGCTCGGC CTGGGCGCAC CGGCGTTACC CCGAAGGGTC CCGCAAGGCC
GAGCGAGCCG CCCGGCGCGC GGCCCGGTTC GCCGCCCGCT GGCGGCCGCG CCGGGACAGG
TTCTTCGACC TGATCGCCGG CCGTCCGGAC GACGAGACGG ATCACGCGGG TCGCGGGGAC
TCCGGCCGGG GGAGTTAG
 
Protein sequence
MWAALSRGYE RVIVEPGKQP LLALLVAFIL TFLFIRLSVR MIRAGVRWWP GNVAVGGVHV 
HHAIFGIAFV LLAGVGAFSP AGGRSPWWDL LAILFGVGAA LILDEFALVL RLKDVYWSEQ
GRMSVDAVIL GAAFTALLIV GATPLGVDGL DTGDHLALWD LIVVLGINIV AVSCSFLKGR
VGFGVVGLLI PLVAVVGAVR LARPGSAWAH RRYPEGSRKA ERAARRAARF AARWRPRRDR
FFDLIAGRPD DETDHAGRGD SGRGS