Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5619 |
Symbol | |
ID | 5673946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6833806 |
End bp | 6834327 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641244472 |
Product | Ion transport 2 domain-containing protein |
Protein accession | YP_001509876 |
Protein GI | 158317368 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00971652 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.344673 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCCAGGCC CGCCCCCGGA GCCGTCCGCA CGCCGGATGG GTGTGGTCGC GGCCGCGATC CTGGCCGGGT GCCTGACGGC CTACTACGCC CTGCCCGTCT ACGGCCACGG CGGCGGGCGA TGGTTCTCGC TGCGGGTGGG GCTGTTCGCC CTCGGCCTGA TCCTGACCGG ATGCCTGCTC GCCAGGCAGG TGGTCTTCGC TCGGCACGTC TCTGTCGCCC AGGTCCGCGC GCAGTGGCTG TTCGCCGGGA TCTGCGTCAC CGTCGTACTG TTCGCCACCG CCTACTACGC GCTGGCGGTC GGTGCGACCG CCCAGATCTC CGGCGTCCGG ACGAAGACCG ACGCGCTCTA TTTCGCCGTC ACCGTGCTGA CCACGGTCGG CTTCGGGGAC ATCCACGCCA CGGGTCAGGC TGCCCGGGTC GTCGTCATCG TCCAGATGGG GTTCGATGTC CTTTTCGTGG CGACCGCGGC CTCGGCGCTG CGCGCGTCGA GTTCGGCTCG CCGGGCGGCG CGCGCGTCCT GA
|
Protein sequence | MPGPPPEPSA RRMGVVAAAI LAGCLTAYYA LPVYGHGGGR WFSLRVGLFA LGLILTGCLL ARQVVFARHV SVAQVRAQWL FAGICVTVVL FATAYYALAV GATAQISGVR TKTDALYFAV TVLTTVGFGD IHATGQAARV VVIVQMGFDV LFVATAASAL RASSSARRAA RAS
|
| |