Gene Franean1_5619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5619 
Symbol 
ID5673946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6833806 
End bp6834327 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content72% 
IMG OID641244472 
ProductIon transport 2 domain-containing protein 
Protein accessionYP_001509876 
Protein GI158317368 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00971652 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.344673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCAGGCC CGCCCCCGGA GCCGTCCGCA CGCCGGATGG GTGTGGTCGC GGCCGCGATC 
CTGGCCGGGT GCCTGACGGC CTACTACGCC CTGCCCGTCT ACGGCCACGG CGGCGGGCGA
TGGTTCTCGC TGCGGGTGGG GCTGTTCGCC CTCGGCCTGA TCCTGACCGG ATGCCTGCTC
GCCAGGCAGG TGGTCTTCGC TCGGCACGTC TCTGTCGCCC AGGTCCGCGC GCAGTGGCTG
TTCGCCGGGA TCTGCGTCAC CGTCGTACTG TTCGCCACCG CCTACTACGC GCTGGCGGTC
GGTGCGACCG CCCAGATCTC CGGCGTCCGG ACGAAGACCG ACGCGCTCTA TTTCGCCGTC
ACCGTGCTGA CCACGGTCGG CTTCGGGGAC ATCCACGCCA CGGGTCAGGC TGCCCGGGTC
GTCGTCATCG TCCAGATGGG GTTCGATGTC CTTTTCGTGG CGACCGCGGC CTCGGCGCTG
CGCGCGTCGA GTTCGGCTCG CCGGGCGGCG CGCGCGTCCT GA
 
Protein sequence
MPGPPPEPSA RRMGVVAAAI LAGCLTAYYA LPVYGHGGGR WFSLRVGLFA LGLILTGCLL 
ARQVVFARHV SVAQVRAQWL FAGICVTVVL FATAYYALAV GATAQISGVR TKTDALYFAV
TVLTTVGFGD IHATGQAARV VVIVQMGFDV LFVATAASAL RASSSARRAA RAS