Gene Franean1_5577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5577 
Symbol 
ID5673905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6757794 
End bp6758579 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content75% 
IMG OID641244431 
Productoxidoreductase FAD-binding subunit 
Protein accessionYP_001509835 
Protein GI158317327 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGGAG CAGCGCTACC AGGGCGACTG AGGGAACGTC TCGCGTGGCG CGTCGCCCGC 
CTCGCCGAGG TCCGCGACGA GACGCCGACC GCGCGCACCC TCGTCCTCGA CGTCCCCGGC
TGGCCCGGGC ATCTGTCGGG CCAGCGGGTG GATGTCCGCC TCACCGCCGC CGACGGCTAC
AGCACCCGCC GCAGCTACTC GCTTGCGGCA CCGGGGGCGG GTGACCGGGT CGAGCTGACG
GTCCAGCGGG TGCCGGGCGG AGAGGTCTCC CCGTATCTGA CGGAGATCTT CTCGGTCGGC
GACCCGGTGG AGATCCGCGG GCCGATCGGC GGCTGGTTCG TCTGGCGTCC CGCCGACCCC
GAGCCGGTGC TGCTGGTGGC CGGCGGGTCG GGCATCGTCC CGCTGATGGC GATGGTGCGC
GCCCGGAGGT CCGCCGCCAG CCGGGTGCCG TTCCGCCTGA TCTGCTCGGT GCGCTCCCCG
GCCGACCTCT ACTACGCGGA CGAGCTGCGC GAGGCCGCGC GCGCCGACCC CGGGCTGGAC
GTCACCCGCT GCTACACCCG GGTCGTCCCG GATCACTGGA CGTCGCCGCC GCGCCGGCTG
CGCCCCGCCG ACCTGGCCGA GGCCGGCTGG CCGCCCGACC TCACGCCGAC CTGCTACGTC
TGCGGCCCGA CCGGCTTCGT CGAGGCCGTC GCGGACGCGC TGGTCGAGAT CGGCCACGAG
CCCGAACGAA TCCGCACCGA GCGCTTCGGT CCCAGCGGCT CGAGCCACCC CGCCGGCACC
GTCTGA
 
Protein sequence
MAGAALPGRL RERLAWRVAR LAEVRDETPT ARTLVLDVPG WPGHLSGQRV DVRLTAADGY 
STRRSYSLAA PGAGDRVELT VQRVPGGEVS PYLTEIFSVG DPVEIRGPIG GWFVWRPADP
EPVLLVAGGS GIVPLMAMVR ARRSAASRVP FRLICSVRSP ADLYYADELR EAARADPGLD
VTRCYTRVVP DHWTSPPRRL RPADLAEAGW PPDLTPTCYV CGPTGFVEAV ADALVEIGHE
PERIRTERFG PSGSSHPAGT V