| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5518 |
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| Symbol | |
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| ID | 5675765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6686578 |
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| End bp | 6688011 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641244374 |
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| Product | integrase family protein |
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| Protein accession | YP_001509778 |
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| Protein GI | 158317270 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0834932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACGA ACAGCGACAA CCACCCGACC ATGAGCCTGC AACAGGCACT CCGAGAGCAC
CTCGACCGTG CCCGCGCCGG ACAGGGCCTG CTCTACCCAC AGCCCGAAGG AGAGACCAAG
TTCGCCTGCG ACATGGGCGA CAGCCGCTAC GGCTGCGCCT GGTGCGACAA CATCGAATGG
CCCGACGGCA ACCCCCCTGG ACGGCGAGTG ATGGCTGCGG GGGACGGTGC CGGGAACGAC
CGGCGGAAGC GGCGGCGCTC CCAGGGCGAA GGCGCCCTGT TCCAGCGGGC GAGCGACGGC
CTGTGGGTCG GCCGCGCCGA TCTCGGCTGG GTGGACGGGA AGCGTTCCCG CAAGACGGTC
TACGGCAAGA CCGAGAAGGA ATGCCGGGAG AAGCTCACCA AGGTCCAGCG CGCGGCCGAA
CTCGGCGTCA ACGTCACGGC TGAGCGCCGG ACGGTCGCGG TCTGGCTGGG GGAGTGGCTC
GACATCAAGG AGGGCGACGG CACCCGCGCG TCGACGCTCC GGGCGTACCG CTGGTTGATC
AACATGCACA TCGTGCCGGT GATCGGCCGT GTCCAGCTCG ACAAGCTGAC TCCGTTGGAC
GTCCGGCGGC TCGTCGCCTC GGCGAAGAAG TCGGGGCTGT CGGCGGGCAG CGTCCGCCAC
GTGCACAGCT TGATCCGCAA CGCTCTGGCG GAAGCCGAGC GGCTGGACCT GGTGGCGCGC
AACGTGGCGA AGGCGGTCAA GGCGCCACCC ACCCCGCATC GGGAGGTTCG GGCGCTGCGG
CCGGAAGAGG CGCGCCGGCT CGTCGAGGTG CTCCGTGGTG AGCGGCTCGA AGCGGTGTTC
GCGTGTGGGC TGATGCTCGG GCTACGCCGC GGGGAGATCC TCGGCCTGCG CTGGTCTGAT
GTCGACCTGG ACGGCGCGAC GCTCCACGTT CGCCAGACCC TGCAACGGGT CGACGGCTCG
CTGATGTTCG TCCCGGCGAA GACGGAGCGG TCCCACCGGC GGCTGCCCAT CCCGCCGAAG
CTGGTGACGA TCCTGCGGCG GCACCGGGCC ACCCAGACAG CGGAACGAAC CGGCCTCGGT
GACGCCTGGA CGGAAACCGG GCTGGTGTTC ACCTCGTCCA TCGGCACGCC GTTGGAACCA
AGGAACGTCA ACCGGCGGTT CGATGTGCTG CGCCGTCAGG CCGGGCTGCC GTGGCTACGG
CTGCATGATC TGCGCCACGC CTTCGCGTCG ATGCTCTTCG CTGAGGGTGT GCCGGCCCGG
ACGGTGATGG AGCTGCTCGG GCACTCCACG ATCCAGCTCA CCATGAACAC CTACACGCAC
GTGATGCCGG AGACCCAGCG CGACGCGGTC GGCCGGCTCG ACCGGATCTT CAACGACGAT
GCCGGCGATG TCGCCGACGT CGACGGAGCG GACGGGGAGG GCCTCGCGGG CTGA
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| Protein sequence | MPTNSDNHPT MSLQQALREH LDRARAGQGL LYPQPEGETK FACDMGDSRY GCAWCDNIEW
PDGNPPGRRV MAAGDGAGND RRKRRRSQGE GALFQRASDG LWVGRADLGW VDGKRSRKTV
YGKTEKECRE KLTKVQRAAE LGVNVTAERR TVAVWLGEWL DIKEGDGTRA STLRAYRWLI
NMHIVPVIGR VQLDKLTPLD VRRLVASAKK SGLSAGSVRH VHSLIRNALA EAERLDLVAR
NVAKAVKAPP TPHREVRALR PEEARRLVEV LRGERLEAVF ACGLMLGLRR GEILGLRWSD
VDLDGATLHV RQTLQRVDGS LMFVPAKTER SHRRLPIPPK LVTILRRHRA TQTAERTGLG
DAWTETGLVF TSSIGTPLEP RNVNRRFDVL RRQAGLPWLR LHDLRHAFAS MLFAEGVPAR
TVMELLGHST IQLTMNTYTH VMPETQRDAV GRLDRIFNDD AGDVADVDGA DGEGLAG
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