Gene Franean1_5485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5485 
Symbol 
ID5673816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6637703 
End bp6638239 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content68% 
IMG OID641244340 
Productglutathione peroxidase 
Protein accessionYP_001509746 
Protein GI158317238 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0386] Glutathione peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.219921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.973287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTCC ATGACTTCAC CGTCGAGGCG ACGGACGGCA CCTCCCGATC CCTGCGCGAC 
TACGCCGGCA AGACGCTGCT GATCGTCAAC GTCGCCAGCA AGTGCGGCCT GACCCCGCAG
TACGAGGGGC TGGAGGCGCT CTACCGCGAC CTGAAGGGGC GGGGGCTGGA GATCCTCGGC
TTCCCCTGCA ACCAGTTCGG CGGCCAGGAG CCGGGCACCG ACGCCGAGAT CCAGGAGTTC
TGCTCGACGA ACTTCGACGT CACCTTCCCC GTCTTCAGCA AGATCGAGGT GAACGGCCCC
GGCGCGGCCC CGCTGTACGA CTACCTGCGC TCGGAGGCCC CCGGCGACTT CGGCCCGGAG
TCGGGCTTCC TCTACGAGCA CATCAAGCGC TCGCGGCCCG AGGCGATCGG TACCGACGAG
GTGAAGTGGA ACTTCACCAA GTTCCTGGTG GACGGCGAGG GCAAGGTCGT CCGCCGCTTC
GAGCCCACCG TCACCCCGGA CGAGCTCCGC GGCGAGCTCG ACACCTCCCT GGCCTGA
 
Protein sequence
MTVHDFTVEA TDGTSRSLRD YAGKTLLIVN VASKCGLTPQ YEGLEALYRD LKGRGLEILG 
FPCNQFGGQE PGTDAEIQEF CSTNFDVTFP VFSKIEVNGP GAAPLYDYLR SEAPGDFGPE
SGFLYEHIKR SRPEAIGTDE VKWNFTKFLV DGEGKVVRRF EPTVTPDELR GELDTSLA