| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5384 |
|---|
| Symbol | |
|---|
| ID | 5673716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 6493412 |
|---|
| End bp | 6494332 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641244240 |
|---|
| Product | amidohydrolase 2 |
|---|
| Protein accession | YP_001509646 |
|---|
| Protein GI | 158317138 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.31399 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTCGCCT CGCTGGACTT CCCGTCGATG GCCCGCTTCT GCGGCCAGTT CTTCGCCAGC
CGAGTCGACC AGGACCCCGG CCTTGCCCTC GCCGTCCTGA AGGCCTACAA CGACTGGCAC
CTCGACGCCT GGTGCGGCTC CTACCGCGAC CGGTTCATCC CCTGCTCGAT CCCGCCCATC
TGGGACCCCC AGCTGATGGC CGCCGAGATC CGCCGGACCG CGGCCAAGGG CTCGCACGCG
GTCAGCTTCT CGATGAACCC CTACGCTCTC GGTCTGCCGT CACTGCACAG CGACCACTGG
GACCCGTTCT GGGCGGCGTG TCAGGAGACC GAGACGGTCG TGTGCGTGCA CATCGGGTCG
GGGCGGCATC GGGTGGATTA CACCTACAAG CAGCACAAGG CATGGACCCG CCCCAACCTC
GGCGGCCGGC TACCGAGCGA AGTCTTCCTC GACCACGTCG TCACCTGCTT CATCGTCGAC
GCCTTCGGCC TGGCCAACCT TGACCGGATG AACGAGGACA TGATCACCTG GGAATGCGAC
TACCCCAACT CCGACAGCAC CTGGCCGCGC TCCCCCGAGG TGGTGGCGGA GGCAGTGGCC
GGGCTGACCG ACACGCAGGT CGACAAAGTC ACCCACCTGA ATGCCATGCG GGTGTTCTCG
TTCGACCCGT TCGCCCTCCG GCCGCGCGAG CAGTGCACGA CCGGCGCGTT GCGGCGGGAA
GTTGCAGGCC ACGACATCTC GATCGTCTCC CGCGGCACTC GGGACTGGAA GGCGGTCACA
GTGGACAGTT CGCCCACTCG CACCAGCCGA CCAGCACGGC GTGAGCGCGG CGCCACTCGC
CGGGGTGCGG GTGCTCGAGG TGGCCTCGCA CGTTTTCGTC CCGTTGTCGG GGGCCGTGCT
CGCCGCGTGG GGAACCCTTG A
|
|---|
| Protein sequence | MLASLDFPSM ARFCGQFFAS RVDQDPGLAL AVLKAYNDWH LDAWCGSYRD RFIPCSIPPI
WDPQLMAAEI RRTAAKGSHA VSFSMNPYAL GLPSLHSDHW DPFWAACQET ETVVCVHIGS
GRHRVDYTYK QHKAWTRPNL GGRLPSEVFL DHVVTCFIVD AFGLANLDRM NEDMITWECD
YPNSDSTWPR SPEVVAEAVA GLTDTQVDKV THLNAMRVFS FDPFALRPRE QCTTGALRRE
VAGHDISIVS RGTRDWKAVT VDSSPTRTSR PARRERGATR RGAGARGGLA RFRPVVGGRA
RRVGNP
|
|---|
| |