| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5345 |
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| Symbol | |
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| ID | 5673679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 6444684 |
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| End bp | 6445640 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641244203 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001509609 |
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| Protein GI | 158317101 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCGGA TCGTCGTCGT CGCCGTCCCG CCGGTCACCA CCCTTGATCT GTCCATCCCG
GCGGCAGTGT TCCCGGCCGC GGTGGTCCAC AGCCAGCCGG CCTACGAGGT CGTGATCTGC
ACGGCCGAGC CCGGGATCGT ACCTGGGTAC ACCGGGCCCA GCGTTGTGGT GGACCGGGGC
CTCGACGTGA TCGACAGCGC CGACACCGTG ATCGTCACGG GAACCGGAGC TCGCGCCCAC
GCCGACCAAC GGGTCCTGGA CGCGCTACAG CGGGCCGCTG ACGACGGCCG GCGCATCGCC
TCGATCTGCA CGGGCGCCTT CGTGCTGGCC CAGGCCGGGC TGCTCAACGG TCGCCCGGCC
ACCACGTACT GGCAGTACTC CCAGGAGATG CGCCGCCGCT TCCCGGCCGT CGACCTGCGG
CCCGACGTCC TGTACGTCGA CGACGGGACC GTGCTGACCT CCGCCGGCCT GGCCGCCGGT
CTCGACCTGT GCATCCACAT GATCCGGCGC GACCACGGGG CGGTGGTCGC CAACGCCGTC
GCCCGAGCCG CGGTCATCGC GCCGATCCGT CCCGGCGGCC AGGCCCAGTT CATCGAGACA
CCGCTGCCAC CGGAGAACGG GACCTCGCTG GCCCAGACCC GCGCCTGGGC GGCGGAGCAC
CTCGCCGAGC CGCTGACACT TGGCCGCCTC GCCGCCCACG CCCACACCAG TACCCGCACG
CTCACCCGCC GCTTCCGGGA GGAGACCGGT CTGAGCCCAC TGCAATGGTT GCTGCACCAG
CGAATCGACC GGGCTCGGGA ACTCCTCGAG GCGACGGATC TGCCGATCAC CGCCGTCGCC
CGGCAAAGCG GCCTGGGAAC CCCCGAGTCG CTGCGCCTCC ACCTCCTGCG CCGCAACGGG
CTCACCCCCC GCGCCTACCG CGACACGTTC ACCCGCGTCG GACCAACCCC GACCTGA
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| Protein sequence | MHRIVVVAVP PVTTLDLSIP AAVFPAAVVH SQPAYEVVIC TAEPGIVPGY TGPSVVVDRG
LDVIDSADTV IVTGTGARAH ADQRVLDALQ RAADDGRRIA SICTGAFVLA QAGLLNGRPA
TTYWQYSQEM RRRFPAVDLR PDVLYVDDGT VLTSAGLAAG LDLCIHMIRR DHGAVVANAV
ARAAVIAPIR PGGQAQFIET PLPPENGTSL AQTRAWAAEH LAEPLTLGRL AAHAHTSTRT
LTRRFREETG LSPLQWLLHQ RIDRARELLE ATDLPITAVA RQSGLGTPES LRLHLLRRNG
LTPRAYRDTF TRVGPTPT
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