Gene Franean1_5304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5304 
Symbol 
ID5673638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6385187 
End bp6385846 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content72% 
IMG OID641244161 
Producthypothetical protein 
Protein accessionYP_001509568 
Protein GI158317060 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.763767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.381566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGCCG CCGGCACCGC GGTGGGCAAC GTCGAGGCAC TGCCCACCGC GGTGCCGGCG 
GTCGTCGACG CGGACTTCTG GTTCGACCCG CTGTGCCCCT GGGCGTGGCT GACCTCGCGC
TGGATGCTGG AGGTCGAGAA GGTCCGGCCC GTCCGGACCA GGTGGCATGT CATGAGCCTG
GCGATCCTCA ACGACGGCCG GGACATGCCC GAGCAGTACC AGGAGCTGAT GAAGCAGGCG
TGGGGGCCGG TGCGCATCTG CATCGCCGCC GCCGCGACCG CGGGGGAGGA GATCCTCCTC
CCGCTCTACA CGGCGCTGGG CCGCCGCCGT CACCTGGAGA AGGCCGAGCT GACGGAGGAG
ACCTTCGTCG CCGCGCTGGA GGAGGTGGGC CTCGACCCGG CGCTGGCGGC GGCCGCGCAC
TCCACGGAGT GGGATGAGCG GCTGCGGGCC AGCCACTCCG ACGGCATCGG CCGGGTCGGC
ATGGACGTCG GGACGCCCGT CATCGCGATC GGGGACAACG CGTTCTTCGG CCCGGTGGTC
ACTCCGACCC CGCGCGGCGA GGCCGCCGGT CGGCTGTGGG ACGGCGTCCT CCTGGTCTCG
GAGACACCTG GCTTCTACGA GCTCAAGCGC AGCCGTGAGC AGGGTCCGAT CTTCGACTGA
 
Protein sequence
MDAAGTAVGN VEALPTAVPA VVDADFWFDP LCPWAWLTSR WMLEVEKVRP VRTRWHVMSL 
AILNDGRDMP EQYQELMKQA WGPVRICIAA AATAGEEILL PLYTALGRRR HLEKAELTEE
TFVAALEEVG LDPALAAAAH STEWDERLRA SHSDGIGRVG MDVGTPVIAI GDNAFFGPVV
TPTPRGEAAG RLWDGVLLVS ETPGFYELKR SREQGPIFD