| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5286 |
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| Symbol | |
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| ID | 5673620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6358613 |
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| End bp | 6361414 |
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| Gene Length | 2802 bp |
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| Protein Length | 933 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641244143 |
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| Product | FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits |
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| Protein accession | YP_001509550 |
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| Protein GI | 158317042 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.135201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.531019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCGGA CCACGCTGAG CGTGATCAGC CCGGCGGGCC ACAACACGCT GACGGGCGAC
GCTCCGTGCG TGGTCGGTCG GGCACGCGGC GCGGACATCG TCATCAACGA CGCACGGGTG
TCCCGGCGTC ATCTCGTGCT TGAGCCGGTC GCCGGCGGCT GGCATGTGCG GGACACCAGC
GCCAACGGCC TCTGGCAGGA CGGGCGCCGG ATGGGGGACA CCACGGTCCG CTCGACCGAG
GTCCGCTTCC GGCTCGGCGC CGCGGACGGC CCTGAGGTCG TGCTGGTGCC CTCGTCCGTC
GGGCTGGCCT CCGGTGGTGC CGGAGCGGGC TCCGCGCCCG CCACCTCGGT ACCCGCTCCC
GCGGTCCCGG CCGGGCCGCC GCCGCGCGTG GCGGGTGCGC CGGGATGGCC GTCGTCCAAC
CCCAACCCCA ACCCCAACCC CGGTCCCGCG CCCGCCGGCC CAGGTCACAC GCCTACTCCC
GGCCACGTGC CCACCCCCGG TCAGGCGCCT GCCCCCGGTC GCGCGCCCGC CTCCGGCCGG
GCCCGGGTAG CGGCACCGCC GACGGCCCCG GCATCGGCCC GCCCGCCGGT CCCGGGGGGC
CACCAGCCAC CGCACGCCGG GGGTCCGGGC GCCGCCGGGC CGGACACCGC CTCCGCGGCG
CTCGACCTGG AGACGGCGCA GAGCGCCATC GTGCACGCCC GCCGCAAGAT GCACCCGCTG
CGGCCCGGCA CGATCCGGCT CGGCCGCTCG CGCGACAACG ACATCTCCGT CGCGGACCTG
CTCGCCTCGC GGCACCACGC CGAGCTGCTG GTCGCCCCCG GCAGGGTCGA GGTCGTCGAC
CTCGGGTCGG CGAACGGCAC GTTCCTCAAT GGCCAGCGCA TCGGGCGGGC CCAGGTCGGG
CAGCGCGACG TCATCGCGAT CGGGCACCAC CTCTACCAGC TCGAGGGCGA CTCGCTGGTG
GAGTACGTCG ACTCGGGTGA CGTCGCCTTC GAGGTGCAGG CGCTGTCGGT GTTCGCCGGC
ACCAAGCAGC TCATGCACGA CATGACCTTC CGGCTCCCCG GCCGCTCGCT GCTCGGGGTG
GTCGGCCCCA GTGGTGCGGG CAAGTCGACC CTGCTCAACG CGCTGACCGG CTTCCGCCCG
GCGGACGTGG GCTCTGTCCG CTACGCCGGG CGGGATCTCT ACGCCGAGTA CGACGAGCTG
CGCCGGCGCA TCGGGTACGT CCCGCAGGCC GATCCGCTGC ACGCCCAGCT CACCGTGCGT
GAGGCGCTCG AGTACGGCGC CGAGCTGCGG TTCCCCGCGG ACACCACGGC GCAGGAACGG
CGCGCCCGCG TCCAGGAGGT CATCGGCGAG CTCGGCCTGA CCGCGCACGC CGGCACGCCG
GTGAGCCGGC TCTCCGGTGG GCAGAAGAAG CGGACGTCGG TGGCCCTCGA GCTGCTCACC
CGGCCGTCGT TGCTGTTCCT GGACGAGCCG ACGTCGGGGC TGGACCCGGC GAACGACCAG
TCGGTGATGG AGACGTTGAA GGGCCTGGCC AAGGGCGGCG GGGTCGGTTC GGCGGACGAG
AGCGGCCGCA CGGTCATCGT GGTCACGCAC AGCGTGCTGT TCCTGGACCT GTGCGACTAC
ATCCTGGTGC TCGCCCCGGG TGGGCACGTG GCCTACTTCG GCCCGTCGGA CGGGGCGCTG
AGCTTCTTCG GGAAGGAGGA CTTCCGGGAG TTCGCGGCGG TGTTCCGGGA GCTGGAAAGC
ACGCCGGGTG CGGAGATGGC GGCTCGGTTC CGCGCCTCGG AGTACTTCGT GCCCTCCGCG
GTCGTGGCGC CGATCGTGCG CAAGGCGCCG GCGGAGCTGC CGAGCGTGCG CCAGCAGCCG
GTCACCTCCC AGCTCGCGAC GCTGACCCGG CGATATCTGC GGGTCGTGCT GGCGGACCGT
TCCTACCTGC GGCTCATCGC CGCCTTCCCG TTCCTGCTCG GGATCATCCC GCGGGTGATC
CCGGCCCCCG ACGGGCTGAA ACCCCTGCCG GACGCGCCTA ATCCGGACGC GATGAAGGTC
CTCGTGGTGC TGGTGTTGTG TGCGTGTTTC ATGGGGATGG CGAACTCGGT CCGCGAGATC
GTCAAGGAAC GCGACATCTA CCGGCGGGAA CGAACGATCG GCCTGTCCCG GACGGCCTAC
CTCGGCTCGA AGATCATCGT CCTCACCGGT ATCACGACCC TGCAGTGCGT GATCTTCACG
CTGATCGGGC TGGTCGGCCG CACGCCGCCG GAGGCGTCCC TGCTGGGCTC GCCGCTGGTG
GAATGCCTGG CCGCGGTGAT CGTCGCTGCG CTGGCGTCCA TGATGATCGG CCTGCTCGTG
TCGACACTGG TCGACAACGC GGACAAGACG ATGCCGATCC TGGTGCTGGT GACCATGGCG
CAGCTCGTGC TCTCCGGCGG GCTGGTGTCG CTGTCCGGCC GTCTGGTGAT GGAGCAGGTC
GCGTGGATCG CCCCCGCCCG GTGGGGCTTC GCGGCGCTGG CGTCCACCGA CGACCTCAAC
GAGGTGTCCA AGCTGGGCAA CGAGGTGCTG CGCACGGACC CGGCCGACGG GCTGTGGGAA
CACAGCGCGG GCATCTGGGT GCTCGACGTC GTCCTCGGCC TGGTCCTCGG CGCGGCGGCG
CTCGCGCTGA CCTCGATGAT GCTGCGCCGG ATCGACCCCA AGGTGACCCG GCCCGCCGCC
CCGCCGCCGG GAGTCGGCCG CCCGCCGCAG GCCGGGCAGG CGCCGCCGGC CGGCCCCGGT
GGGCCCGGCG GCTACGGTGC CGCGCCCGGC GCGCGCCGCT AG
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| Protein sequence | MDRTTLSVIS PAGHNTLTGD APCVVGRARG ADIVINDARV SRRHLVLEPV AGGWHVRDTS
ANGLWQDGRR MGDTTVRSTE VRFRLGAADG PEVVLVPSSV GLASGGAGAG SAPATSVPAP
AVPAGPPPRV AGAPGWPSSN PNPNPNPGPA PAGPGHTPTP GHVPTPGQAP APGRAPASGR
ARVAAPPTAP ASARPPVPGG HQPPHAGGPG AAGPDTASAA LDLETAQSAI VHARRKMHPL
RPGTIRLGRS RDNDISVADL LASRHHAELL VAPGRVEVVD LGSANGTFLN GQRIGRAQVG
QRDVIAIGHH LYQLEGDSLV EYVDSGDVAF EVQALSVFAG TKQLMHDMTF RLPGRSLLGV
VGPSGAGKST LLNALTGFRP ADVGSVRYAG RDLYAEYDEL RRRIGYVPQA DPLHAQLTVR
EALEYGAELR FPADTTAQER RARVQEVIGE LGLTAHAGTP VSRLSGGQKK RTSVALELLT
RPSLLFLDEP TSGLDPANDQ SVMETLKGLA KGGGVGSADE SGRTVIVVTH SVLFLDLCDY
ILVLAPGGHV AYFGPSDGAL SFFGKEDFRE FAAVFRELES TPGAEMAARF RASEYFVPSA
VVAPIVRKAP AELPSVRQQP VTSQLATLTR RYLRVVLADR SYLRLIAAFP FLLGIIPRVI
PAPDGLKPLP DAPNPDAMKV LVVLVLCACF MGMANSVREI VKERDIYRRE RTIGLSRTAY
LGSKIIVLTG ITTLQCVIFT LIGLVGRTPP EASLLGSPLV ECLAAVIVAA LASMMIGLLV
STLVDNADKT MPILVLVTMA QLVLSGGLVS LSGRLVMEQV AWIAPARWGF AALASTDDLN
EVSKLGNEVL RTDPADGLWE HSAGIWVLDV VLGLVLGAAA LALTSMMLRR IDPKVTRPAA
PPPGVGRPPQ AGQAPPAGPG GPGGYGAAPG ARR
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