Gene Franean1_5265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5265 
Symbol 
ID5673599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6332366 
End bp6333601 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content69% 
IMG OID641244120 
Productcell cycle protein 
Protein accessionYP_001509529 
Protein GI158317021 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0772] Bacterial cell division membrane protein 
TIGRFAM ID[TIGR02210] rod shape-determining protein RodA 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.282695 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGG ACCCGGGTCC TACCGCGCTG CGCTCCTCCC CGGTGCTGGT CCGGGGGCGG 
ATCGGGCAGC TGCGCGACCG CGCGTCCGGG CGGCACTCGC CGCTGCGCCG GCTCGACTGG
CCGCTTCAGA TCAGCGTGAT CGCGCTGGCC CTCCTCGGAG CCCTGCTGGT CTGGTCGGCG
ACCCGCCAGC GGCTGGAGGA GACCGGGGGA GACCCACAGA CCTTCCTGAA ACGCCACCTG
CTGAACCTGG TGATCGGCCT GTTGCTCGGG GCCGCCGCGA CCCTGGTCGA CTACCGGATC
CTGCGGGCGT ACGCGCCCTT CGTCTATCTC GGCTCGCTGG TCGGTCTCAT CGCCGTCCTC
CTGGTCGGCA CCACCGTCAA CGGCGCCCAC TCATGGATCG TGCTCCCGGC CGGCTTCCAG
CTCCAGCCGT CGGAGTTCGC CAAGGTCGCG CTCGTCGTCG GGGCGGCGAT GATCCTCGGG
GAGAAACACG AGGACCGGCA CACCGGCATC CGGCGCGGCG CGCCGGGCCA CGGCGACGTG
CTGCTCGTGC TCGGGCTCGC CGTCGTGCCG ATGGCCCTGA TCATGCTGCA GCCCGACTTC
GGCACGGTCA TGGTGCTGGT GTTCGTCACC CTCGGCATGC TGGCGGTGAG CGGCGCGCCG
CGGCGCTGGG TGCTCGGCCT GATCCTGTGC GGGGTCCTCT TCGGCGGGGC GATCCTGCAG
TTCCACCTGC TCAAGCCCTA CCAGGAGGCA CGCCTCACCT CGTTCGTCTC CGAGAACAAG
GCGGCGTCGT CCACCGGATA CAACGTCGAC CAGGCGATGA CCGCGATCGC GAACGGCGGC
ATCACCGGTC GTGGTCTGTT CGAGGGCCAG CAGACCCAGG GCCAGTTCGT GCCCGAGCAG
CAGACCGACT TCGTGTTCAG CGTCGCCGGC GAGGAGCTCG GCTATCTGGG GGCCGGCGGT
GTGATCGTCC TGCTCGGCGT GGTGCTCTGG CGGGCGCTGA CGATCGGCTT CCACTCGCAG
GACTCCTTCG GGGCGCTCAT CGCCACCGGC GTGGTCTGTT GGTTCACCTT CCAGATCTTC
GTCAACATCG GCATGTGTCT CGGTGTGATG CCGGTGACCG GCCTCCCGTT GACGTTCCTG
TCCTACGGCG GTTCCTCGAT GTTCGCGAAC ATGATCGCGG TCGGCCTGCT GCAGAACGTC
CGCCTGCGCT CGCGCTCGGA CCCCTACGCG CTCTGA
 
Protein sequence
MTQDPGPTAL RSSPVLVRGR IGQLRDRASG RHSPLRRLDW PLQISVIALA LLGALLVWSA 
TRQRLEETGG DPQTFLKRHL LNLVIGLLLG AAATLVDYRI LRAYAPFVYL GSLVGLIAVL
LVGTTVNGAH SWIVLPAGFQ LQPSEFAKVA LVVGAAMILG EKHEDRHTGI RRGAPGHGDV
LLVLGLAVVP MALIMLQPDF GTVMVLVFVT LGMLAVSGAP RRWVLGLILC GVLFGGAILQ
FHLLKPYQEA RLTSFVSENK AASSTGYNVD QAMTAIANGG ITGRGLFEGQ QTQGQFVPEQ
QTDFVFSVAG EELGYLGAGG VIVLLGVVLW RALTIGFHSQ DSFGALIATG VVCWFTFQIF
VNIGMCLGVM PVTGLPLTFL SYGGSSMFAN MIAVGLLQNV RLRSRSDPYA L