Gene Franean1_5207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5207 
Symbol 
ID5673541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6252167 
End bp6253021 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content75% 
IMG OID641244061 
Producthypothetical protein 
Protein accessionYP_001509471 
Protein GI158316963 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.011067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGACCAC ACGTTCATGT CCGTCCCCGG GGCGGCCGGC GCCCAGGCGG CCTTCGCCCC 
GGGTGGGTGG GCCGCTACCG TCGGGACATG GCGCCCGACT CACCCGATCC CGGCCCGGCT
CCCGCGACCG GCGACGCCGA CGCGCCGGTC GACCCGAGCC GGGCCGGCAG TCCGGCCGAG
GCCGGCCCCG CGAAAACCCC CGGCCAGGCT GCCACCACCA CCGCCCCCGC CGGCAAGGCA
GACACCCCCG GCCCCGCTTT CGGCGTCGGC AAGGCGACGA GCGCCGGCCC GCGCCGCAGC
CCGTCCGCGC CGATCACCGA TGCCGACCGG CAGGCGACCG CCGACCAACT GCGTGCGGCC
TGCGGCGACG GGCGGCTGAC CCTGGACGAG TTCAGCGAGC GGGTCGGGGG CGCCTGGGCC
GCCCAGACCG CGGAGGAGCT GGCGCAGGCC GGGGCCGGCA TCGTCCCGCC GCGGGTCGGC
ATCCAGCGCT CGTCGTCGAC GATCGTCAAC ATTCTCGGCG ACGGACGGCG GCTCGGCCGT
TGGCGGATGC CCCGGCGGAC GGTGATAGTC AACCTGCTCG GCGACTGGAC GCTGGATCTG
CGCGGTGCGC TGATGGACGA GGATGCCGTG ACCGACGGCG TGCTCGACAT TCTCTATATC
TCGCTGATCG GCGATCTCAC CATCAGCGTC CCGGACGGGA TGGAGGTCGA CATGAGCGGC
CTGGTCGTGC TCGGCGACCG GCACCTGGAG CTGGCCATGG TCTCGGAACG CCCGGGAACC
CCCCGGCTGC GGTTGCGGCT GGCCGGCCTG ATCGGCGACG TCTGGGTGAG CAGCGGGTCG
CTGACCGGGC GGTGA
 
Protein sequence
MRPHVHVRPR GGRRPGGLRP GWVGRYRRDM APDSPDPGPA PATGDADAPV DPSRAGSPAE 
AGPAKTPGQA ATTTAPAGKA DTPGPAFGVG KATSAGPRRS PSAPITDADR QATADQLRAA
CGDGRLTLDE FSERVGGAWA AQTAEELAQA GAGIVPPRVG IQRSSSTIVN ILGDGRRLGR
WRMPRRTVIV NLLGDWTLDL RGALMDEDAV TDGVLDILYI SLIGDLTISV PDGMEVDMSG
LVVLGDRHLE LAMVSERPGT PRLRLRLAGL IGDVWVSSGS LTGR