Gene Franean1_5204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5204 
Symbol 
ID5673538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6248214 
End bp6249119 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content77% 
IMG OID641244058 
Productmethyltransferase type 11 
Protein accessionYP_001509468 
Protein GI158316960 
COG category[S] Function unknown 
COG ID[COG4627] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.521724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCACC GGACGGCACG GCTCCCGGCG CCACCAGGCC GGGCACGGCG CCTGCGGTAC 
CACCGCAACA GCCGGGGCGA GCTGTGGGTG AACGTCACCT CGTCCCACCT GGTCCTGCCG
GACTACGTCA ACCTCGACCC CGCGTTCTCC CCCGGCCTCG TCGCCGCCTA CCCCGCGCTG
CGGCGGACGT CCGACCTCAC CCGGCTACTG CGGGCGTCCC GCACGCTGCG CCTGCTGCGC
AGGGGGTGCG CGGCTGGCTG GCGATCGGCG CGACGGCCGC GGCTGGCCGC GGTCGTCGCC
CGGCTCGCCC CCCGCTCCAG CCCACGTCCG CGTCCGCGCT GGCGCCGGCG CGACCTACCG
GCGGGGCCGC GGGGCGGGCG GGGCTGGACG ATCCGCGAAC AGTGGGAGGC CCGGGAGGTC
GCCGTCGTCG CGCGACACGA CCCGCGGGCC GCGCTGCCAC TGGACGACGA CTCGGTCGAT
CACCTCCTCT GCGCGCACGT CCTGCAGGAG CTGCCGCCGC CGGCGATGCG GCGGGCGCTG
GAGGAGTACG CCCGCGTCCT GCGCCCGGGC GGGACGCTGC ACGTCGTGCT ACCTGACCTG
CGGTACGCGG TCGACCGGTA CGTCCGCGGC GAGATCGACG CCGACGAGCT GGTGGCGTGG
CAGCGCCTGC GCTCGCCCGG GGAGGAACGG GGCGCGGGGC GCCTCGGCCT GCCCCGGCGC
GGGAACGCGC GGCACCCGAC CAGTCCGGTG AACCGGTGGC ACTACGACGC GCACACGGCC
GAGCGCCGGC TCGTCGGCGC AGGCTTCAAG ATCGCCTCCG GGACGTCTGC CTCTGGGACG
TCCCCGAGCT CGCCGGTGTA CCGGGAGGAC CCCGGCTCGT TGCACCTGGT GGCCGTCCGC
GCCTGA
 
Protein sequence
MTHRTARLPA PPGRARRLRY HRNSRGELWV NVTSSHLVLP DYVNLDPAFS PGLVAAYPAL 
RRTSDLTRLL RASRTLRLLR RGCAAGWRSA RRPRLAAVVA RLAPRSSPRP RPRWRRRDLP
AGPRGGRGWT IREQWEAREV AVVARHDPRA ALPLDDDSVD HLLCAHVLQE LPPPAMRRAL
EEYARVLRPG GTLHVVLPDL RYAVDRYVRG EIDADELVAW QRLRSPGEER GAGRLGLPRR
GNARHPTSPV NRWHYDAHTA ERRLVGAGFK IASGTSASGT SPSSPVYRED PGSLHLVAVR
A