Gene Franean1_5198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5198 
Symbol 
ID5673532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6239332 
End bp6239868 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content70% 
IMG OID641244052 
Producthypothetical protein 
Protein accessionYP_001509462 
Protein GI158316954 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.614683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCAGG ATGGAAACGT GGCCATCTAC GCGTTGGGGG ACCTCGAACC CTCGATCGAT 
CCGTCCGCGT ACGTTCATCC CGACGCGACG GTGATCGGGA ACGTCACGAT CGGCCCGGAG
TCGACGGTCT GGCCCGGCGT CGTGCTCCGC GGCGACCAGG GGCGCATCGT GATCGGCGCG
CGGACGTCCA TCCAGGACGG CACGGTGATC CACACGACCG CGCAGTTCCC CACGATCGTC
GGGGACGACT GCGTGATCGG GCACATCGTG CACCTCGAGG GCTGCGTGGT CGAGGACGGC
TCCCTGGTCG GCTCCGGGTC GATCGTCCTG CACCAGGCCC GGGTGGCACG CGGCGCCCTG
GTCGCCGCCG GCGCCGTGGT CGGCAACCGG ATGGTGGTTC CCGAGCGGGC GATGGCGTTG
GGTATCCCGG CGAAGATCCG CGAGGGCGCC GCCTCGCAGG AGCTCATCAC CATGGCGGCC
GCCCACTACG TCGAGAACGG ACGCCGTTTC CGCAAGGACC TACGCCGCCT GGACTGA
 
Protein sequence
MRQDGNVAIY ALGDLEPSID PSAYVHPDAT VIGNVTIGPE STVWPGVVLR GDQGRIVIGA 
RTSIQDGTVI HTTAQFPTIV GDDCVIGHIV HLEGCVVEDG SLVGSGSIVL HQARVARGAL
VAAGAVVGNR MVVPERAMAL GIPAKIREGA ASQELITMAA AHYVENGRRF RKDLRRLD