Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5198 |
Symbol | |
ID | 5673532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6239332 |
End bp | 6239868 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641244052 |
Product | hypothetical protein |
Protein accession | YP_001509462 |
Protein GI | 158316954 |
COG category | [R] General function prediction only |
COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.614683 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCAGG ATGGAAACGT GGCCATCTAC GCGTTGGGGG ACCTCGAACC CTCGATCGAT CCGTCCGCGT ACGTTCATCC CGACGCGACG GTGATCGGGA ACGTCACGAT CGGCCCGGAG TCGACGGTCT GGCCCGGCGT CGTGCTCCGC GGCGACCAGG GGCGCATCGT GATCGGCGCG CGGACGTCCA TCCAGGACGG CACGGTGATC CACACGACCG CGCAGTTCCC CACGATCGTC GGGGACGACT GCGTGATCGG GCACATCGTG CACCTCGAGG GCTGCGTGGT CGAGGACGGC TCCCTGGTCG GCTCCGGGTC GATCGTCCTG CACCAGGCCC GGGTGGCACG CGGCGCCCTG GTCGCCGCCG GCGCCGTGGT CGGCAACCGG ATGGTGGTTC CCGAGCGGGC GATGGCGTTG GGTATCCCGG CGAAGATCCG CGAGGGCGCC GCCTCGCAGG AGCTCATCAC CATGGCGGCC GCCCACTACG TCGAGAACGG ACGCCGTTTC CGCAAGGACC TACGCCGCCT GGACTGA
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Protein sequence | MRQDGNVAIY ALGDLEPSID PSAYVHPDAT VIGNVTIGPE STVWPGVVLR GDQGRIVIGA RTSIQDGTVI HTTAQFPTIV GDDCVIGHIV HLEGCVVEDG SLVGSGSIVL HQARVARGAL VAAGAVVGNR MVVPERAMAL GIPAKIREGA ASQELITMAA AHYVENGRRF RKDLRRLD
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