| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5189 |
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| Symbol | |
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| ID | 5673523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6230145 |
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| End bp | 6231698 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 641244043 |
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| Product | deoxyribonuclease |
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| Protein accession | YP_001509453 |
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| Protein GI | 158316945 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.186668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGCGCC CCGTCCCCGT CCCGCCCAGC GAACTGGTGG AGCTTGACGT CGGCCCGGTC
GCGCACCGTG GGCTCTGTGT GGCCCGCGCC GGCGGTCGGG TCGTGTTCGT GCGTCACGCG
CTGCCCGGCG AGCGGGTACG GGTCCGGATC ACCGACGTCT CCCACGACCG TTACTGGCGC
GCCGACGCCG TCGAGATCCT CGTCGCCTCC CCGGACCGGG TGGCGGCCCC CTGCCCGCAC
GCGCGTCCCG GCGGGTGCGG AGGGTGCGAC TGGCAGCACG CCACGCCCGC CGCGCAGCGC
CGGCTCAAGG CGCGGGTGGT CGAGGACGCG CTGCGGCGGC TGGCCGGCCT CGACCGCGCC
GTGCTGGTCG AGGCGTTGCC GTCGGAGGGG CCTGACGGGC TGGGCTGGCG CACCAGGATG
CGCTTCTCGC GGACGTCCGA CGGCGGCGTC GGGCTGCGCG CGCACCGCTC CCACGAGGTG
GTGCCCACTC CTGACTGCAA GATCGCTCAT CCGCTGCTCG CCCGGGTGAT CGCCGACCCG
GTCTTCCTGA CCGGCGACGG CTCGCCCGAG GTGACCGGCC AGGCGGTGGA GCTCGTGGCG
ATGCCCGGCG ACGCCGTGGC GTACTCGACG CGGTCCGGCG GGTGGCGCGT CACCGAGACC
GGCCCCGCCG CCGCCGACGC CGAGGGCACC GGCGCCACCC GCGTCGACGG CGCCACCCGC
GTCGACGGCG CCACCCGCGT CGACGGCGCC ACCCGCGTCG ACGGCGCCGA CGGCGCCGAT
CCCGACAGTG CTCTTCGTGC CAGTGCCGTT CCCGTCCGCA CCGGTCCTGA CCGCGGCGAG
CCGGCGCCGG TCGAGGTGGT CGAGACGGTC GAAGGCCGCG AGTTCCGGCT GGAGCCGGGG
GTCTTCTGGC AGGTCCACCC GGCCGCCGCG GCGACGCTGG TCGCCGCGGT GCGCGAGGCG
GCCGCGGCCG CGGCGGGGGA CACGGCCCTC GACCTGTACT GCGGGGCAGG GCTGTTCGCC
GCGTTCCTCG CCGAGGCGGT CGGACCGACC GGGCGGGTCA TCGCGCTGGA ATCCGACGAG
GCCGCCGTCC GCTCCGCCGC GCGGAGCCTG GCTGACCTGC CCTGGGTGTC GCTGCGTTCC
CTGAGGGTGA CCCCGGCGAC GGTCCGCGGC CTCGTCGGCG CGGCGGACCA GCCGGCCGCG
CCCGCCGACG GCCTCCCGGC CGGCGGCGCC ACGCCCGGCC CGGCCCGGCG GGCGGTGGAC
GTCGCGGTGC TCGACCCGCC GCGGACCGGC ACGGGTCGTG AGGTCATGAC CGAGCTTCTC
GCGCACCGGC CGCGCCGGGT CGTCTACGTG GCCTGCGACC CCGCCGCGCT CGCGCGGGAC
GTGGCGGTCG CGGCGGGCGA GGGGTATCGG CTCACCGAGC TCCGCGCGTT CGACCTGTTC
CCGATGACCT CGCACGTGGA GTGCGTGGCG ACCTTGGAGC CCGCGCCCGC GGGCGCGACC
GGCTCCGCGG AGCCGGCCCG GCCAGGCACG GGCAGCACGG CGCTACCGCG ATGA
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| Protein sequence | MTRPVPVPPS ELVELDVGPV AHRGLCVARA GGRVVFVRHA LPGERVRVRI TDVSHDRYWR
ADAVEILVAS PDRVAAPCPH ARPGGCGGCD WQHATPAAQR RLKARVVEDA LRRLAGLDRA
VLVEALPSEG PDGLGWRTRM RFSRTSDGGV GLRAHRSHEV VPTPDCKIAH PLLARVIADP
VFLTGDGSPE VTGQAVELVA MPGDAVAYST RSGGWRVTET GPAAADAEGT GATRVDGATR
VDGATRVDGA TRVDGADGAD PDSALRASAV PVRTGPDRGE PAPVEVVETV EGREFRLEPG
VFWQVHPAAA ATLVAAVREA AAAAAGDTAL DLYCGAGLFA AFLAEAVGPT GRVIALESDE
AAVRSAARSL ADLPWVSLRS LRVTPATVRG LVGAADQPAA PADGLPAGGA TPGPARRAVD
VAVLDPPRTG TGREVMTELL AHRPRRVVYV ACDPAALARD VAVAAGEGYR LTELRAFDLF
PMTSHVECVA TLEPAPAGAT GSAEPARPGT GSTALPR
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