| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5187 |
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| Symbol | |
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| ID | 5673521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6227480 |
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| End bp | 6228637 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641244041 |
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| Product | solute-binding protein |
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| Protein accession | YP_001509451 |
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| Protein GI | 158316943 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0173275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGACA ACTCGCTCGA CGACGGGGTA CCTCGGCGCG GTCGGATGCG CGGCCATGCG
GGGAGACGGC GAGGTCGCCT TTTCGTGGCC GCGTCGGTGG CGGTCATGGT CGTGCTGGCC
GCCGTGGGAT GCACATCGGA CTCGTCCGAT GACGAGGTGC CCCAGGGAGG ATCCGAGAGC
GGAACCATCG CGCTCCTGTT ACCCGAGACC CAGACGACCC GCTACGAATC GGCCGACCGC
CCCTACTTCG AGGCGCGGAT GGCGAAGATC TGCCCCGACT GCAAGGTGCT GTACTCGAAC
GCCGACCAGG ACTCGGCCGC CCAGCAGAAC CAGGCCGAGC AGGCCATGAC CAACGGCGCC
AAGGTCCTCG TCCTGGACCC GGTGGACGGC GAGGCCGCGG CGGTGATCGC CCGCAATGCG
CGGGACCGTG GCGTGCGCGT GGTCTCCTAC GACCGGCTCA TCCAGAAGGC GCCCGTCGAC
GCCTACATCT CCTTCGACAA TGAGAAGGTC GGCCAGTTGC AGGGCCAGGC GCTCCTCGAC
GCGATCGGCG ACCGGGCCGG CGCCGGCAAG GTCATCATGA TCAACGGCTC GCAGGACGAC
CCGAACGCCC AGCAGTTCAA GGACGGCGCG CTGTCGGTCC TGGAGGGCAA GGTGACGATC
GGCTTCGACA CGTTCACCCC CGACTGGTCT CCCGACACCG CCGGTCGGGA GATGGACCAG
GCGATCACCA CCGTCGGCCG GGAGAACATC GTCGGGGTCT ACGCCGCGAA CGACGGCATG
GCCGGCGCCG TGGTCGCCGC GCTGCGCCGG GCGAACGTGA ACCCGCTGCC GCCCGTCACC
GGCCAGGACG CCGAACTCGC CGGGGTACAG CGCGTACTCG CCGGAGATCA GCACATGACC
GTCTACAAGG CCATCCGCCC CGAGGCGGAG CAGGCGGCCG ACCTGGCGCT CGCGCTGCTG
CGCGGTGAGC CCGTCGACAC GATCGCGACC GGGCACGTCG ACAACGGCAA CGGCCAGGTT
CCCGCCGTCC TGCTGGAACC GGTCGCGGTC ACCCGGGACA CCGTCGCCGC GACGGTGGTG
AAGGACGGCT TCATCGCCAA GGCCGACCTG TGTGCCGGCA CGTACGCGAC AGCCTGCGCG
TCCGCCGGCA TCTCCTGA
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| Protein sequence | MADNSLDDGV PRRGRMRGHA GRRRGRLFVA ASVAVMVVLA AVGCTSDSSD DEVPQGGSES
GTIALLLPET QTTRYESADR PYFEARMAKI CPDCKVLYSN ADQDSAAQQN QAEQAMTNGA
KVLVLDPVDG EAAAVIARNA RDRGVRVVSY DRLIQKAPVD AYISFDNEKV GQLQGQALLD
AIGDRAGAGK VIMINGSQDD PNAQQFKDGA LSVLEGKVTI GFDTFTPDWS PDTAGREMDQ
AITTVGRENI VGVYAANDGM AGAVVAALRR ANVNPLPPVT GQDAELAGVQ RVLAGDQHMT
VYKAIRPEAE QAADLALALL RGEPVDTIAT GHVDNGNGQV PAVLLEPVAV TRDTVAATVV
KDGFIAKADL CAGTYATACA SAGIS
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