Gene Franean1_5176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5176 
Symbol 
ID5673510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6211772 
End bp6212194 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content74% 
IMG OID641244030 
Producthypothetical protein 
Protein accessionYP_001509440 
Protein GI158316932 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0667281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC CTTCCATCCG GGACGGTTCC ACCCGGAACA GCGCCACCCG GGACGGGGCG 
TGGCCGATGG GCGCCGCCCG CGCGGTGTCC CTGGCCGAGG CGACCTCCTT CCTCCTGCTC
CTGATCGCGA CCGCGGTCAA GCACGGGGCC GACCACGAGA TCGGTGTGAA GATCCTCGGG
CCGGTCCACG GTGGGCTGTT CATCGCGTAC TGCCTGCTCG TCCTGTACGT GGGGTCGCTG
CGGCGGTGGC CGGTGAAGCG GACGCTGCTC GCGCTCGGGG CGTCCGTCCT GCCGGTGGCG
CCGTTCTTCG TGGAGCGGCA CTGGCTGCGG GAGCCGGCCC CGGCATCCGA CGGCGCGGCC
GGGCACGGCA CGTCCGAGCA CGGCGGCTCC CCGGGACGCG CCAGCTCCGC GCCCGCGAGC
TGA
 
Protein sequence
MTDPSIRDGS TRNSATRDGA WPMGAARAVS LAEATSFLLL LIATAVKHGA DHEIGVKILG 
PVHGGLFIAY CLLVLYVGSL RRWPVKRTLL ALGASVLPVA PFFVERHWLR EPAPASDGAA
GHGTSEHGGS PGRASSAPAS