| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5114 |
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| Symbol | |
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| ID | 5673449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6124272 |
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| End bp | 6125657 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641243965 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001509379 |
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| Protein GI | 158316871 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.279407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.776114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGGTTC TCCAGGCGTA CCGGTTCGCA CTCGACCCGA ACCAGGCGCA GCTTGCCGAC
CTGCGGCGTC ATGCCGGGGC GGCCCGGTTC GTGTTCAACT GGGGTCTGGC CCGGGTGAAA
GCCGCCCTGT CGCAGCGAGA CGCCGAGCAG TCCTACGGCC TGACCGGGGA CATGCTCACC
CCGGTGCCGT GGACGCTGCC CGCGCTGCGC CTCGCCTGGA ACGAGGCCAA GAGCACCGTC
GCCCCGTGGT GGTCGGCGTG CTCGAAGGAG GCGTACTCGT CCGGCCTCGA CCAGCTCGCC
CGCGGGTTGA AGAACTTCAC TGATTCCCGC ACGGGGAAGC GGAAGGGGAA GCGGGTCGGT
TTCCCCCGGT TCAAGAAGCG TGGCAGGGCC CGCGACTCGT TCCGGTACAC GACCGGCGCC
TACGGCCCGG CCAGCAACCT ACAGGTGAAG CTGCCCCGCC TGGGCCGGGT CAAGGTCCAC
GAGGCGATGG GTGCGCTCAC CGGCCGGTTG GCGGCCGGGT CCGCCCGGCT GCTCGGTGCG
ACCGTGTCGC GCACGGCGGG CCGCTGGTTC GTGGCGTTCA CCGTCGAGAT CGATCGTGAG
ATCCCCCAGA ACCCGTCGGC CCGCCAACGT GCGGGCGGCG CGGTCGGTGT CGACGCGGGA
GTGAAGCACC TCGCTGTCCT GTCGACCGGT GAGCAGGTCG ACAACCCCAG GCCACTCACC
CGCTCGCTGC GCAGGCTGCG CACTGCGTCC CGGGCCTGTG CCCGCTCGAA GCCGGGCAGT
GCCGGCCGCC GCCAGCGCGC TGCCGCACTG GGCCACCTGC ACGCCCACAT TGCCCACCAG
CGGCGCGATG GGCTGCACAA GCTCACCACC CGGCTCACGA AGAACCACGA CGTGATCGTG
GTCGAGGATC TGCATGTCGC CGGGATGGTC CGTAACCGCC GGCTCGCCCG CGCGGTCTCG
GACACCGGGA TGGCCGAGAT CCGGCGCCAA CTCACCTACA AGACCGTCTG GTACGGATCG
CGGCTCGTCG TCGCGGACCG GTGGTATCCG TCGAGTAAGA CCTGTTCCGG CTGTGGCTGG
CGAAACCCAA GCCTCACCCC GGCCGACCGC ACGTTCGCCT GCCAGTCCTG CGGGCTGGTG
ATCGACCGCG ACCTGAACGC CGCGATCAAC CTGCGCAACC TCGTCGCCGC CAGTACGTCG
GAGACGGAAA ACGCCCGTGG AGCCGACCGT AGGACCCAGC CTGCTGGGCG GGTGGCTGGG
AAGCGGGAAC CCGGCACCGT GGGCATGACC CCGTGCGAGC GGGTCAGACC GGGGGTGCCT
CACCGAGAGG CGAGGCGGCA TGACCGGGCG CTACCAGGCG CTCACATGCA ACGGCGGTGG
CACTGA
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| Protein sequence | MKVLQAYRFA LDPNQAQLAD LRRHAGAARF VFNWGLARVK AALSQRDAEQ SYGLTGDMLT
PVPWTLPALR LAWNEAKSTV APWWSACSKE AYSSGLDQLA RGLKNFTDSR TGKRKGKRVG
FPRFKKRGRA RDSFRYTTGA YGPASNLQVK LPRLGRVKVH EAMGALTGRL AAGSARLLGA
TVSRTAGRWF VAFTVEIDRE IPQNPSARQR AGGAVGVDAG VKHLAVLSTG EQVDNPRPLT
RSLRRLRTAS RACARSKPGS AGRRQRAAAL GHLHAHIAHQ RRDGLHKLTT RLTKNHDVIV
VEDLHVAGMV RNRRLARAVS DTGMAEIRRQ LTYKTVWYGS RLVVADRWYP SSKTCSGCGW
RNPSLTPADR TFACQSCGLV IDRDLNAAIN LRNLVAASTS ETENARGADR RTQPAGRVAG
KREPGTVGMT PCERVRPGVP HREARRHDRA LPGAHMQRRW H
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