| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5093 |
|---|
| Symbol | |
|---|
| ID | 5673428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 6095335 |
|---|
| End bp | 6096009 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641243944 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001509358 |
|---|
| Protein GI | 158316850 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1496] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.196567 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00745461 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGTCC TGGTGACCTC GCGTGACGGC GGCACGAGCA TGCCGCCGTA CGCGGGGCTC
AACCTCGGTG ACCACGTGGG TGATGATCCG GAGGCGGTCA GCGTGAACCG GCGGCTGCTC
GCGTCCCGGG TCGGCCGGCC GGTCCAGTTC ATGCGGCAGG TGCACGGGGC CCAGGTGAGC
CTGGTGCGGG CACCCGGACC GCCGCCCGAG GCCGACGCCA TGGTCACCGA CGCCGCCGGC
GTCGCGCTCG CGGTGCTGGT GGCCGACTGC GTGCCGGTGA TGTTCGAGTC GCCGGCGGCG
GTCGGCGTCG CGCACGCCGG CCGCCAGGGG ATGGCGGCGG GCGTGCTGGC GGCCACCTTG
AAGATCTTCG ACGAGCTCGG CGTCGACCGC TCGTCGATCG ACGTCACGCT GGGCCCGGCG
ATCTGCGGGC GGTGCTACGA GGTGCCCGCG GACATGCGCG CCGACATCCA GCGGCGGGTT
CCGGGCAGTG GGTCGGAGAC CCGAGCGGGC ACGCCCGCGC TGGATCTCCG GGCCGGGCTG
CGCGCCCAGC TGGCGACGGC CGGCGTGGGC CGTGTTGTGG TATCCGATCG TTGCAGCGCC
GAGTCGGGGG ATCTCTACTC GTACCGCCGC GACGGGCGGA CCGGGCGGTT CGCCGGCCTC
GCCTGGCTGT CATGA
|
|---|
| Protein sequence | MPVLVTSRDG GTSMPPYAGL NLGDHVGDDP EAVSVNRRLL ASRVGRPVQF MRQVHGAQVS
LVRAPGPPPE ADAMVTDAAG VALAVLVADC VPVMFESPAA VGVAHAGRQG MAAGVLAATL
KIFDELGVDR SSIDVTLGPA ICGRCYEVPA DMRADIQRRV PGSGSETRAG TPALDLRAGL
RAQLATAGVG RVVVSDRCSA ESGDLYSYRR DGRTGRFAGL AWLS
|
|---|
| |