| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5067 |
|---|
| Symbol | |
|---|
| ID | 5673403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 6066276 |
|---|
| End bp | 6066923 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641243918 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001509333 |
|---|
| Protein GI | 158316825 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.512117 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0696013 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGTCA GCGGCGGTCA GCGGATCGAT CGGGTGATCA CCCGCGGTGA CTTCACCCTC
GACGGCCAGT CGTTCACCGT CGACAACAAC GTGTGGCTCG TCGGCGACGA GCAGTCGGTG
GTCGTCGTCG ACGCGGCCCA CGACCCGTCC GTCATCGAGG CCGCGGTGGA CGGCCGGCGG
GTGTCCCTGA TCATCGCGAC GCACGGCCAC AACGACCACA TCAACGCGGC TGCCGAGCTG
GCCGACCGGG TGCGCGCCCC GATCGCGCTA CACCCGGCCG ACGCGGTGCT GTGGCGGCAG
GTCTACCCCG AGCGCGGGCC GGACGAGGCG CTGCGCGACG GCCAGGTGAT CCCGATCCCG
GGCGGTTCCC TGCGCGTGCT GCACACCCCC GGCCACTCCC CGGGCGGCGT CAGCCTGTTC
GGGGAGATCA ACGGAGACCC CGTGCTGTTC AGCGGGGACA CCCTGTTCCG CGGCGGCCCG
GGGGCGACCG GCCGGTCGTT CTCCGACTTC CCGACCATCC TGGGCTCCAT CCGGGCGAAA
CTGCTCACCC TGCCCTCCGG GACGGTCGTG CACACCGGCC ACGGCGACGA CACGACCATC
GGTGAGGAAG CCGTGGACTA CGACGACTGG GTGCTCCGCG GCCACTGA
|
|---|
| Protein sequence | MAVSGGQRID RVITRGDFTL DGQSFTVDNN VWLVGDEQSV VVVDAAHDPS VIEAAVDGRR
VSLIIATHGH NDHINAAAEL ADRVRAPIAL HPADAVLWRQ VYPERGPDEA LRDGQVIPIP
GGSLRVLHTP GHSPGGVSLF GEINGDPVLF SGDTLFRGGP GATGRSFSDF PTILGSIRAK
LLTLPSGTVV HTGHGDDTTI GEEAVDYDDW VLRGH
|
|---|
| |