| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5060 |
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| Symbol | |
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| ID | 5673396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6058881 |
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| End bp | 6060071 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641243911 |
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| Product | prephenate dehydrogenase |
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| Protein accession | YP_001509326 |
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| Protein GI | 158316818 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.01744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.042313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTCCCG GCGAGCCCCC CACGGCGGCC GGGCGGTTCT CGCCGCCCTA CGTCCGCCCG
GGGGTCGAGG CGGCCGCAGG GGGCTCGTCC GCGTGGGATC CGGCGCACCT GCCCGAGCTG
CGCCGGGTGG CCGTCGTCGG GTCCGGGCTG ATCGGCACGA GCATCGGGCT GGCGCTGTCC
GGGCGCGGCG TGGAGGTGTT CCTGCGTGAC TCCGACGACG CCCAGGTGAA GCTCGCCGAG
GCGATGGGCG CCGGCCGGCC ATGGCAGGGC GAACGGGTCG ACCACGCGGT GATCGCCACC
CCGCTGCCCA CCGTCGCCGC CGAGCTGCGC GACCTGCAGC GCGGCGGCCT GGCGACGACG
GTCAGCGACG CCGGCAGCGT GAAGACCCGC CCGCTGGTCG AGGCCGTCCA GCTCGGCTGT
GATCTCGGGG CCTGGTGCCC GGCCCATCCG ATCGCCGGGC GGGAGCGGCA CGGGGCGGTG
TCCGCCCGCG CGGACCTGTT CGCCGAGCGG GTGTGGGCGG TCTGCCCGGT GGCCCACACC
GGCGCGGACG CGATCGCGGC GACCGCCGCC CTCGCCCTCG CCTGCGGCGC GACACCGGTG
CGCACCACCC CCGAGCGCCA CGACGCCGCG ATGGCCGTCC TCTCGCACGT TCCGCAGCTG
GTGGCGAGCG TGCTCGCCGG GAGCCTGCTC GGCCTCGACT CGCACGACCT GCCGTTCGCC
GGCCAGGGCT TCCGCGACAC GACCCGCCTC GCCGACAGCG ACCCCGTCCT GTGGGCGTCG
ATCATCGAGG GCAACCGCGG GCCCATCGCC GAGCGCGTGC GCCGGCTGGG GCGGGAGTTC
ACCCACCTCG CGGACGTGCT CGCCGAGGGG ACCCGTGACG AGGTGGTCGA GGCGGTCACG
GCGGCGATCC ACGGCGGGCG GCACGGCCGG TCGCTGCTGC CCCGCAAGGC CGGTGCCCGG
GCACTTCCGT GGGGCTGGGT CGGTGTGGTG CTCGACGACC GTCCCGGCCA GCTCGCGGCG
CTGTTCGCCG TGATCGGCGA GTGGGACGTC AACATCGAGG ACGTCGGGCC GTTCGAGCAC
AGCCTGGACG CCCCCGCCGG CATCGTCGAG ATCGCGGTCG ATCCGGACGG CGCGGACGGA
CTCGTCGAAC GGCTGACGCG GGCCGGATGG ACGGCATATC GGCGCTCGTG A
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| Protein sequence | MSPGEPPTAA GRFSPPYVRP GVEAAAGGSS AWDPAHLPEL RRVAVVGSGL IGTSIGLALS
GRGVEVFLRD SDDAQVKLAE AMGAGRPWQG ERVDHAVIAT PLPTVAAELR DLQRGGLATT
VSDAGSVKTR PLVEAVQLGC DLGAWCPAHP IAGRERHGAV SARADLFAER VWAVCPVAHT
GADAIAATAA LALACGATPV RTTPERHDAA MAVLSHVPQL VASVLAGSLL GLDSHDLPFA
GQGFRDTTRL ADSDPVLWAS IIEGNRGPIA ERVRRLGREF THLADVLAEG TRDEVVEAVT
AAIHGGRHGR SLLPRKAGAR ALPWGWVGVV LDDRPGQLAA LFAVIGEWDV NIEDVGPFEH
SLDAPAGIVE IAVDPDGADG LVERLTRAGW TAYRRS
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