| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5019 |
|---|
| Symbol | |
|---|
| ID | 5673357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 6013858 |
|---|
| End bp | 6014754 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641243873 |
|---|
| Product | pentapeptide repeat-containing protein |
|---|
| Protein accession | YP_001509288 |
|---|
| Protein GI | 158316780 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGACA ACGGGGGAAC GCACCGGCGC GCCGGCCGGC GCTGGCTGTG GATCGTCGCG
GGGATCGCCG CAGTGGGTGC GGTGTGCGCG GTGGTCGGGA TCTGGCACCT ACCCGGCCGG
ATGTATCCGG GGACCAGCGA CGGCGCGGTC CAGGCCCGCG CCGCGTTGCA GGGCGGGCTG
CTCACTGCCG CTGCCGCGCT GACCGCGGTA GCGGGCGGTC TGATCGCGCT CGACGAGACC
CGGCAGGCGA ACGCCGAGGT CCGGCGGGCG AACGAGAACA CCCACGTTCG GGAGCTGTAC
GCCAGCGCGA TCAGCCAGCT CGGCTCGGAC AGTCTCGATG TCCGCCTCGG CGGGATCTAC
GCCCTGGAAC GGGTCGCCCG TGACAGCGCC GCAGACCAGC GCACTGTCGT CGAAGTGCTC
TCCGCGTTCG CCCGCGTCCA CAGCACCGAC CCCGCCCTAC GCCCCGACGC CCCCGACTCG
GCCAGCCCCA TCCTCCACGC CGTCGACGTC CACGCTGCCG TCACCGTGCT GGCCCGCTTG
CCCATCCTCA ACGGCGTCCC CCGCGCCGAT CTCGTCGGAG CAGACTTCAC CGGCCCCGCC
ACGCTTCACC GCCTCCAAGC ACCCGGCGGC ATTCTCGCTG GCGTCTCCCT GGGGGAGGCG
GACCTCAGCG GAGCGAACCT CGCCCGTGTG AAGCTCCGCG ACGCCGATCT CACCGACGCA
TGTCTCATGC TTGCGGACCT CACCGAGGCG GACCTCACCG GAGCGGACCT CACCGGCGCA
GACCTCACGA GCGCTGTCGG GTTGACGCAG GAGCAGGTGG GCGCAGCGTC GGGAGATTCG
CGAACGCGCC TGCCGGCAGG GCTGATATCA CCAGCGTCGT GGGTGTCGGG GGTGTAG
|
|---|
| Protein sequence | MTDNGGTHRR AGRRWLWIVA GIAAVGAVCA VVGIWHLPGR MYPGTSDGAV QARAALQGGL
LTAAAALTAV AGGLIALDET RQANAEVRRA NENTHVRELY ASAISQLGSD SLDVRLGGIY
ALERVARDSA ADQRTVVEVL SAFARVHSTD PALRPDAPDS ASPILHAVDV HAAVTVLARL
PILNGVPRAD LVGADFTGPA TLHRLQAPGG ILAGVSLGEA DLSGANLARV KLRDADLTDA
CLMLADLTEA DLTGADLTGA DLTSAVGLTQ EQVGAASGDS RTRLPAGLIS PASWVSGV
|
|---|
| |