| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5014 |
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| Symbol | |
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| ID | 5673352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6008808 |
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| End bp | 6010115 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641243868 |
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| Product | putative branched-chain amino acid transport system |
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| Protein accession | YP_001509283 |
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| Protein GI | 158316775 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAATA CAGAGAATGT GGCCGCCGGG ATGCCCCGCA GGCGGTCGCG GCGACGCTCG
GTGTCCACCC GCCTGGGCGT CCTGGCGGTG GCGGCGAGCC TGCTGCTCGC CGCCGGATGC
GGCGGCGGCA GCGCGGACCC GTCGACGGAC GACAGCACCC CCAGCAGGGA CATCTCCGCC
GTCCTCGGGC CGATCGCCGA GGCCAAGGGC GCGCCGGTGC GGATCGGGAT GATCTCGGAC
GGCAAGGGTC CGGTGTCGGA CCTCTCCGTC GAGTTCGACA TGGCCAAAGC CACCGTCGGG
TACCTGAACG AGCGCCGTTC CGGCATCGCG GGCCGGCCGA TCGAGCTGGT GACGTGCGAG
GCCCTGGCCG ACCCGGCCAA GGGCACCGAC TGCGCGAACC GGATGGTCGA GGAAGATGTC
GTCGCCGTCG TCGTCGGCTC CTCGTCGATC GTGGAGAGCA TCTGGCGGCC TCTGCACGAC
GCTCGCGTGC CGGTGATGTT CCACTCCGCG AACGGCGCCC CGCTGCGGGA CAGCGAGTCG
ACCTTCGCCA TCACCGACTC CGCCTTCTCG CTGATCAACT TCCCGATCCA GCTGGCGAAG
GAGAAGGGCG CCGGGAAGGT GACAGCGGTC ACGATCGACG TGCCGTCCGC GACGGGCATC
TACCGGACCG CCGCTCCGTC GGCGTTCGAC GAGGCCGGCA TCGAACTCTC GGTCGTGCCG
ATCCCCCCGG GCACGGCCGA CATGATTCCG CAGATGCAGA ACATCGCCTC CGGCGACCCC
GGCATCGTCG AGGTGACCGG AAACGACGCG TTCTGCATCG CCGCGTTCAA CGGTCTGCGG
GCGGTCGGAT TCACCGGGAC GGTCACGGGC GTCTCGCAGT GCATCACTGA CAGGACCCGC
AAGGCGGTGC CGGGCGATTT CCTGGAGGAC ATGCCCGTCC CCGCGACGGT GCCGCTCGGC
ACGGACAACC CGGCGACCCA GCTGATCAAC GCGGTCGCGA CCACCTACGG CAAGGACGTC
GACACCGGCC GCACGGCTGC GATGGCCATG TTCACGGTGT TCGCCGCCTT CCAGTCCGCG
ACCGGGGAGA TCTCCGGCGA GGTCTCCCCG GAGACCATCA TCGCCGCGAT CAAGGGGATG
CCGGAGAAGG AGCTGCCGGC CGCCGGGGGG CTGCGGTTCC GCTGCAACGG CAAGGCCGAC
CCGGACCTGC CGGCGGTCTG CGTCCGCGGC GGGCTGGTGA CGACCCTCGA CGAGGAGGGC
CAGCCCACCG AGTACGAGGT GATCGGCAGC ACCCCCATCG AGGACTAG
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| Protein sequence | MPNTENVAAG MPRRRSRRRS VSTRLGVLAV AASLLLAAGC GGGSADPSTD DSTPSRDISA
VLGPIAEAKG APVRIGMISD GKGPVSDLSV EFDMAKATVG YLNERRSGIA GRPIELVTCE
ALADPAKGTD CANRMVEEDV VAVVVGSSSI VESIWRPLHD ARVPVMFHSA NGAPLRDSES
TFAITDSAFS LINFPIQLAK EKGAGKVTAV TIDVPSATGI YRTAAPSAFD EAGIELSVVP
IPPGTADMIP QMQNIASGDP GIVEVTGNDA FCIAAFNGLR AVGFTGTVTG VSQCITDRTR
KAVPGDFLED MPVPATVPLG TDNPATQLIN AVATTYGKDV DTGRTAAMAM FTVFAAFQSA
TGEISGEVSP ETIIAAIKGM PEKELPAAGG LRFRCNGKAD PDLPAVCVRG GLVTTLDEEG
QPTEYEVIGS TPIED
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