Gene Franean1_4967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4967 
Symbol 
ID5673306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5961943 
End bp5962197 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content71% 
IMG OID641243821 
Producthypothetical protein 
Protein accessionYP_001509237 
Protein GI158316729 
COG category[S] Function unknown 
COG ID[COG3809] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.760569 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTGTC CGAAGTGTCA CGGAGCCATG CGGACCTACA ACCGCAACGG CGTCCAGATC 
GAGCAGTGCG ACAACTGCCG CGGGATCTTC CTCGACTACG GCGAGCTCGA GGCGCTCACC
CGCCTGGAGT CGCAGTGGGC GCAGCCGGCG CCGCCGCCTC CGCCGATGGC GCCCGGCGGC
CACTACGCCC CGCCGGCCTG GGGCTCGCAT GGCCACGGCC ACGGCCGCCT CACCCGGATG
TTGTTCTCCT CCTGA
 
Protein sequence
MVCPKCHGAM RTYNRNGVQI EQCDNCRGIF LDYGELEALT RLESQWAQPA PPPPPMAPGG 
HYAPPAWGSH GHGHGRLTRM LFSS