Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4960 |
Symbol | |
ID | 5673299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 5954003 |
End bp | 5954506 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641243814 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001509230 |
Protein GI | 158316722 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0298636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.832443 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGCA GAGCCGATGC CGCGGACATG CCGTACGACG GCGAGGCGAA GACGCCGGAC AGACTGCGCC GACGGGCCAG TCGCCTGCTG TCACAGATGT CCGCGCAGTC GGATCGGCTG ATGAACGAGG GGCTGGCCCA GGTCGACGCC CGCAAGTGGC ACTACGCCGT GCTCGCCTCG TTGCAGGAGT ACGGCCCGGG CAGCCAGGCG ACGCTGAGCC GACGCACCGG CATCTACCGC AGCGACATGG TCGGCGTCCT CAACGAACTG GCCGAGCGCG GCCTCGTTGA GCGGGCGCCG GATCCCGACG ACCGCCGCCG TAACGTCATC ACGATCACCG CCCAGGGCCG CCGGCACCTC CGCCGCCTCG ACAAGGTCCT GGACGACCTC CACGAAGAGC TGCTCGCCCC GCTGACCCCC ACCGAAGGCG ACCAGTTCGT GCAACTGCTC ACCCGCCTGC TGGACCACCA CACGCAGCAG GCACCCCACC CCCCGATCCC CTGA
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Protein sequence | MTSRADAADM PYDGEAKTPD RLRRRASRLL SQMSAQSDRL MNEGLAQVDA RKWHYAVLAS LQEYGPGSQA TLSRRTGIYR SDMVGVLNEL AERGLVERAP DPDDRRRNVI TITAQGRRHL RRLDKVLDDL HEELLAPLTP TEGDQFVQLL TRLLDHHTQQ APHPPIP
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