Gene Franean1_4960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4960 
Symbol 
ID5673299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5954003 
End bp5954506 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content70% 
IMG OID641243814 
ProductMarR family transcriptional regulator 
Protein accessionYP_001509230 
Protein GI158316722 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0298636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.832443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCA GAGCCGATGC CGCGGACATG CCGTACGACG GCGAGGCGAA GACGCCGGAC 
AGACTGCGCC GACGGGCCAG TCGCCTGCTG TCACAGATGT CCGCGCAGTC GGATCGGCTG
ATGAACGAGG GGCTGGCCCA GGTCGACGCC CGCAAGTGGC ACTACGCCGT GCTCGCCTCG
TTGCAGGAGT ACGGCCCGGG CAGCCAGGCG ACGCTGAGCC GACGCACCGG CATCTACCGC
AGCGACATGG TCGGCGTCCT CAACGAACTG GCCGAGCGCG GCCTCGTTGA GCGGGCGCCG
GATCCCGACG ACCGCCGCCG TAACGTCATC ACGATCACCG CCCAGGGCCG CCGGCACCTC
CGCCGCCTCG ACAAGGTCCT GGACGACCTC CACGAAGAGC TGCTCGCCCC GCTGACCCCC
ACCGAAGGCG ACCAGTTCGT GCAACTGCTC ACCCGCCTGC TGGACCACCA CACGCAGCAG
GCACCCCACC CCCCGATCCC CTGA
 
Protein sequence
MTSRADAADM PYDGEAKTPD RLRRRASRLL SQMSAQSDRL MNEGLAQVDA RKWHYAVLAS 
LQEYGPGSQA TLSRRTGIYR SDMVGVLNEL AERGLVERAP DPDDRRRNVI TITAQGRRHL
RRLDKVLDDL HEELLAPLTP TEGDQFVQLL TRLLDHHTQQ APHPPIP