Gene Franean1_4948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4948 
Symbol 
ID5673287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5940107 
End bp5940799 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content73% 
IMG OID641243802 
ProductNADPH-dependent FMN reductase 
Protein accessionYP_001509218 
Protein GI158316710 
COG category[R] General function prediction only 
COG ID[COG0431] Predicted flavoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATC TGACGATCTC CAACCAGCGC GCGGCGGCTG AAGCCGGGCC CGCGGACACA 
CCACCGAGTG CCGCCGAGCA CACGCCGGAC ATCACACCGC TGCGGGTCGC GGTCGTGCTC
GCGAGCGTCC GCGCCGCCCG GTTCGGCCCG GTCGTGGCCG GGTGGTTCGC CCGCCGGGCC
GGGCAGCGCC CCGACGTCAC CGTGGACGTC GTCGACCTCG CCGGGATCGC CGGGATCGCC
GGCGTGGACA CCGCCGTTGT CGACACCGCC GTTGTCGACA CGGCCGATGT CGACCCGATG
ACCTGGGAGT CCTTCGCGGA CCGCATCGGC GCCGCCGACG CGGTCGTGAT CGTCACCCCG
GAGTACAACC ACAGCTTCCC CGGACCGCTC AAGACCGCCG TCGACGCACT CGGCCGGCAG
TGGCACGCCA AGCCCGTCGC GTTCGTCTCC TACGGCGGGA TGTCCGGCGG GCTACGCGCC
GTCGAGGCGT TGCGGGTCGT CTTCGCCGAG CTGCACGCGG TCACGATCCG CGACACGGTC
AGCTTCCACA ATGCCTGGAG CCGGTTCGGT GCCGACGGCG AGCCGCTCGA CCCCGGCCCG
GTGGACGGCG CGGCGACAGC GCTGCTGGAC CAGCTCTGCT GGTGGGGGTC CGCCCTGCGC
GACAAGCGGC GCACCCACCC GTACCAGCGT TGA
 
Protein sequence
MSDLTISNQR AAAEAGPADT PPSAAEHTPD ITPLRVAVVL ASVRAARFGP VVAGWFARRA 
GQRPDVTVDV VDLAGIAGIA GVDTAVVDTA VVDTADVDPM TWESFADRIG AADAVVIVTP
EYNHSFPGPL KTAVDALGRQ WHAKPVAFVS YGGMSGGLRA VEALRVVFAE LHAVTIRDTV
SFHNAWSRFG ADGEPLDPGP VDGAATALLD QLCWWGSALR DKRRTHPYQR