Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4911 |
Symbol | |
ID | 5673251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 5898349 |
End bp | 5898951 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 641243766 |
Product | hypothetical protein |
Protein accession | YP_001509182 |
Protein GI | 158316674 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00161519 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | GTGACAGCCG GCCCGCCCCC CGGCGCGGCG CGGCGCCTCC GGCCGACGGC GCGGCCCCGC GACGCGCTCG GCCGGCCTCT CCCCCACGGA GCCGCCGGGG TCCCACCGTT GCCGGACGAC CTCCCCGCGT CACCGCGCGC GGCGCTGAGA GCCGCGCAGG ACCTGCTGGA CGCCGGTCTG TACTTCCAGG CACACGAGGT CCTCGAACAA GCGTGGAAGG CCGCTCCGGC GGCCGAGCGA GGCCTGTGGC GGGGCCTGAC ACAGGTCGTG GTCGGGCTGG TCCACGCGGC CCGCGGCAAC ACCCGCGGGG CGACGGCCCT GCTGCGACGC GGGCTGACCG AGCTGGTTCC CCACCTGTGC GAACCCACCG CGGACGAGGG CCTGGCCGGT GACGGCCCAT GTCCCGGCCA CGCGCGACGG GAAGCCCTGG ACTCCCCCAC CGGTGACCGG CAGCCCACGC CGGACGGCTG GCGGGCCCAC GGCGTGAACC TGCCGGGTGT CGTGCGGTGG GCCGAGGACC TGCTCCGCCG GCTCGAGAAG CCGGGAGCGC AGGCCGGCGG AGTGCCACCG CCCCCGCGCC TCGTCACCCA GGGACACGGC TGA
|
Protein sequence | MTAGPPPGAA RRLRPTARPR DALGRPLPHG AAGVPPLPDD LPASPRAALR AAQDLLDAGL YFQAHEVLEQ AWKAAPAAER GLWRGLTQVV VGLVHAARGN TRGATALLRR GLTELVPHLC EPTADEGLAG DGPCPGHARR EALDSPTGDR QPTPDGWRAH GVNLPGVVRW AEDLLRRLEK PGAQAGGVPP PPRLVTQGHG
|
| |