| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4899 |
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| Symbol | |
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| ID | 5673239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5882087 |
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| End bp | 5883853 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641243754 |
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| Product | hypothetical protein |
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| Protein accession | YP_001509170 |
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| Protein GI | 158316662 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5305] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0731796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0477636 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACG TCGCGGTGCG GCCGGCGGAA CACACCCCCG AGCCGGTCGA CAGGGTCGGA
GCTCGACCCG ACCGCGAGCA CCGGATCTTC CGGGGCGCGC TGGTGCTGAT CATCGCTGCG
GCGGTGGTGG TGCGCTTCAT CGCACGCCAG CCGCTGTGGC TCGACGAGGC ACAGAGCGTG
GCGATCGCCC GCCTGCCGCT GTCGGGTGCG GCGCCCACCA TGTGGGACGG CCTCCTCCAG
GACGGCTCGC CGCCCCTCTA CTACATCCTG CTGCACCTGT GGATCAGCGT CTTCGGCGAC
GGCACCGCGT CGGTGCGCGG GATGTCCGCC GTCATCAACC TGGGCTCCGC GGTGCCGGTG
TTCTATCTCG GACGCCGGCT CGTCGGTGAC CGCGGCGCGA AGGTCGCGGT GGTGCTGTAC
CTCACCTCGC CGTTCGCGCT GTACTTCGGC ACCGAGACCC GGATGTACAG CCTGATCGTG
CTGCTCACGG CGCTCGGCGG GCTGGCCCTG GAGCGGGTGC TGCGGGTGCC GTCGGTGAAG
AACGTGGTGC TGCTGGCCGT GGCGTCGGGA TGCCTGGCCC TGACGCACTA CTGGTGCCTC
TACCTGCTGA TGACCGTGGG TGCGTGGCTG GTCGGGCTCG TCTTCGTCCG GCCGCGGGTG
GCGGCGGCGC GCGCCGCCCG CCGCGGTCGC GCCGGGCGTT CCGGGGCGCA CTCGCGCGGC
GGGCGCCGTC CGGGCGGGCC GGCGCCGACG CCGGCTGGCG CATCCGAGCA GCCCACGGCC
GCGCCCGAGC TGCTCGCCGA CGCCGCCGGC GGCGCACGCC GGGCCGTGCC CACCTGGCAC
CCCCGCGGCC CGCTCGCCGG GATCATCGGG ATCATCGCCG GCGGCCTGGT GTTCGCTCCG
TGGCTGCCGA ACTTCCGCTC CCAGCTCGCC CACACCGGGA CGCCCTGGGG CGAGCCGGCG
AGCTTCGCCG CCGTCAGCCA CGCGTACGGG CAGTGGGCCG GTGGGCCGAC CACACTCGGC
CGGCTGTTGC TGTTCCTGAT CACCGGCCTG GTCGCCGCCG GGATCGCCGG CCGTCCACTG
GGCGGGCGGT TCGTCCTGCT CGACCTGAAG GGCCTCGAGC CGGGCCGCAC GCTGTTCTTC
CTGGCCACCG GGACGCTGAT CGTCGCCGTG GCGGCCGGCA AGCTGGTGGG CAACGCGTGG
GCCGACCGGT ACACCGCGAC GGCGTTCGTC CCGTTCCTGC TCGTGGTGGG ACTGGGCGCG
ACAATGCTGG CCGACCGCCG GGTGTTCCAC GGCGTGGTCG CGGTCGCGGC GCTCGTCGGT
GTCATCGCCG GGACGAGCGA CGTGCGGCGG GAACGGTCCC AGGCCGGCGA GGCCGCGGCC
GTCCTCACCC GGCTGTCCAG GCCGGGCGAC ATCCTGCTGG TGTGCCCGGA CCAGCTGGGG
CCGGGCCTCG CGCGCACCGT GCCGTCCTGG CTCAAGGTGT ACGTGGTGCC GACCTACGCC
GCCCCGGACC GGGTCGACTG GGTCGACTAC GAGGAGCGCA ACGAGTCCGC CAACGGCGTG
GCGATCGCCC AGCGGGCGAT CGCGGAGGCC GGGACGAACA CCGTGTTCAT GGCCGGCTCC
GGCGCCTACC GGACCTACGA GGTGCTGTGC ACCCAGGTCC GGGCGACGCT GCAGACGCAG
CGGCCGGTGG CCGACGAGGT GATGGAGCAG GGTCTGCCGG CACGGGTCTA CGAGAACTAC
GCCCTGCTGC GGTTCCGGGC GTCGTGA
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| Protein sequence | MTDVAVRPAE HTPEPVDRVG ARPDREHRIF RGALVLIIAA AVVVRFIARQ PLWLDEAQSV
AIARLPLSGA APTMWDGLLQ DGSPPLYYIL LHLWISVFGD GTASVRGMSA VINLGSAVPV
FYLGRRLVGD RGAKVAVVLY LTSPFALYFG TETRMYSLIV LLTALGGLAL ERVLRVPSVK
NVVLLAVASG CLALTHYWCL YLLMTVGAWL VGLVFVRPRV AAARAARRGR AGRSGAHSRG
GRRPGGPAPT PAGASEQPTA APELLADAAG GARRAVPTWH PRGPLAGIIG IIAGGLVFAP
WLPNFRSQLA HTGTPWGEPA SFAAVSHAYG QWAGGPTTLG RLLLFLITGL VAAGIAGRPL
GGRFVLLDLK GLEPGRTLFF LATGTLIVAV AAGKLVGNAW ADRYTATAFV PFLLVVGLGA
TMLADRRVFH GVVAVAALVG VIAGTSDVRR ERSQAGEAAA VLTRLSRPGD ILLVCPDQLG
PGLARTVPSW LKVYVVPTYA APDRVDWVDY EERNESANGV AIAQRAIAEA GTNTVFMAGS
GAYRTYEVLC TQVRATLQTQ RPVADEVMEQ GLPARVYENY ALLRFRAS
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