Gene Franean1_4875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4875 
Symbol 
ID5673215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5848508 
End bp5849674 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content77% 
IMG OID641243730 
Producthypothetical protein 
Protein accessionYP_001509146 
Protein GI158316638 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.401748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGA CGGCGGAACA CGGGCGCTGG CACCGCCTCC GAGCCGCGGC GGGCCGCGCC 
ACCGGACCTG CGCGCCGCAC GGCCGGACCT GCGCGCCGCA CGGCGGTGAC GGTCGTCGGG
ATGTCCGTCC TGCTCGGCCT CGTCGTCTGT CTCTACGGCT CCACGGTCAC CTCGGTGCGT
CCCCGTGGGC TTCCCGTGGT CGTCGCCGGC CAGCCGCAGG GCGCGAAGGC CCTCACGGAG
GCGGTCGAAC GGATGTCGCC GGGCGCCCTG CGTATCGGTG TCGTCCCGGA CGCCGCCGCC
GCCGACCGGG TGCTGCGCGA CCGGAAGGCT TACGCCGCGT TCGTCATCAC CGACGACGGG
CTCGCGCTGC GCCTCGCGTC CGCGGCGAGC CCCGCCGTGG CCGAGGCGCT GGTCCGCGGA
ATGTCGGTGA CGTTTCCCGA TCTGCGGATC CCCGTCGTCG ACGTCGTCCC CAACGCCTCC
GCCGATCATC AGGGTGGCGG GGTGTCCGCC GGCTACCTGC CGCTGGTGCT GATCGCGGCG
GCGGCGGGCG TGCTGCTGGC GCGCGCCGCC CGGACGAGGC AGGCCCGTCT CGGTGGCCTC
GTCGGCTTCA TGGTGGCCGC CGGGGTGGCC GGCACCCTGG CCCTCGGTGG GGGTCTCGAC
GTGCTGCCCG ACACGTTCGG GAGCAGCGTG GTCGTCCTGG CGATGGTCGC CGGGGCCGTG
GTGGCACCCG TCCTCGGGCT GGGCGCGGTG GCCGGGGGGC GCGGGCTCGT CGCGGCTGTC
GGCGTGACCG TGCTCGGCGC GGCCCTCTCC GGCGCGTCGT CGGCGCCGGA GATGCTGCCG
ACGCCGTGGG GCGGCCTGGG TCAGCTGCTG CCGCCCGGAG CGGGGGTGAC CCTGCTGCGG
TCCACCCTGT ACTTCGATGG TGCCGGTGGC GGGCGTGGGG CGGCCGTCCT GGCGATCTGG
GCGGTCGCCG GGATCGCCCT GATCCTGCTC GGCCGGGAGC GCGCGGGCGG CGCCGGGACG
ATTCCGGCCG GGACGTCGGT TCCGAGCGAA GCCACCGCCG CGCCGGCGGC GGCCGCGGTC
GCCGCCGGGC TGGTCGTGCG CCCCCGGGAG GCCACAGCTG AGACCAGCCC GAGCGTCTCC
CCACGCGAAG GCGGGTTCCG AGCATAG
 
Protein sequence
MDLTAEHGRW HRLRAAAGRA TGPARRTAGP ARRTAVTVVG MSVLLGLVVC LYGSTVTSVR 
PRGLPVVVAG QPQGAKALTE AVERMSPGAL RIGVVPDAAA ADRVLRDRKA YAAFVITDDG
LALRLASAAS PAVAEALVRG MSVTFPDLRI PVVDVVPNAS ADHQGGGVSA GYLPLVLIAA
AAGVLLARAA RTRQARLGGL VGFMVAAGVA GTLALGGGLD VLPDTFGSSV VVLAMVAGAV
VAPVLGLGAV AGGRGLVAAV GVTVLGAALS GASSAPEMLP TPWGGLGQLL PPGAGVTLLR
STLYFDGAGG GRGAAVLAIW AVAGIALILL GRERAGGAGT IPAGTSVPSE ATAAPAAAAV
AAGLVVRPRE ATAETSPSVS PREGGFRA