Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4875 |
Symbol | |
ID | 5673215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 5848508 |
End bp | 5849674 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 641243730 |
Product | hypothetical protein |
Protein accession | YP_001509146 |
Protein GI | 158316638 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.401748 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTGA CGGCGGAACA CGGGCGCTGG CACCGCCTCC GAGCCGCGGC GGGCCGCGCC ACCGGACCTG CGCGCCGCAC GGCCGGACCT GCGCGCCGCA CGGCGGTGAC GGTCGTCGGG ATGTCCGTCC TGCTCGGCCT CGTCGTCTGT CTCTACGGCT CCACGGTCAC CTCGGTGCGT CCCCGTGGGC TTCCCGTGGT CGTCGCCGGC CAGCCGCAGG GCGCGAAGGC CCTCACGGAG GCGGTCGAAC GGATGTCGCC GGGCGCCCTG CGTATCGGTG TCGTCCCGGA CGCCGCCGCC GCCGACCGGG TGCTGCGCGA CCGGAAGGCT TACGCCGCGT TCGTCATCAC CGACGACGGG CTCGCGCTGC GCCTCGCGTC CGCGGCGAGC CCCGCCGTGG CCGAGGCGCT GGTCCGCGGA ATGTCGGTGA CGTTTCCCGA TCTGCGGATC CCCGTCGTCG ACGTCGTCCC CAACGCCTCC GCCGATCATC AGGGTGGCGG GGTGTCCGCC GGCTACCTGC CGCTGGTGCT GATCGCGGCG GCGGCGGGCG TGCTGCTGGC GCGCGCCGCC CGGACGAGGC AGGCCCGTCT CGGTGGCCTC GTCGGCTTCA TGGTGGCCGC CGGGGTGGCC GGCACCCTGG CCCTCGGTGG GGGTCTCGAC GTGCTGCCCG ACACGTTCGG GAGCAGCGTG GTCGTCCTGG CGATGGTCGC CGGGGCCGTG GTGGCACCCG TCCTCGGGCT GGGCGCGGTG GCCGGGGGGC GCGGGCTCGT CGCGGCTGTC GGCGTGACCG TGCTCGGCGC GGCCCTCTCC GGCGCGTCGT CGGCGCCGGA GATGCTGCCG ACGCCGTGGG GCGGCCTGGG TCAGCTGCTG CCGCCCGGAG CGGGGGTGAC CCTGCTGCGG TCCACCCTGT ACTTCGATGG TGCCGGTGGC GGGCGTGGGG CGGCCGTCCT GGCGATCTGG GCGGTCGCCG GGATCGCCCT GATCCTGCTC GGCCGGGAGC GCGCGGGCGG CGCCGGGACG ATTCCGGCCG GGACGTCGGT TCCGAGCGAA GCCACCGCCG CGCCGGCGGC GGCCGCGGTC GCCGCCGGGC TGGTCGTGCG CCCCCGGGAG GCCACAGCTG AGACCAGCCC GAGCGTCTCC CCACGCGAAG GCGGGTTCCG AGCATAG
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Protein sequence | MDLTAEHGRW HRLRAAAGRA TGPARRTAGP ARRTAVTVVG MSVLLGLVVC LYGSTVTSVR PRGLPVVVAG QPQGAKALTE AVERMSPGAL RIGVVPDAAA ADRVLRDRKA YAAFVITDDG LALRLASAAS PAVAEALVRG MSVTFPDLRI PVVDVVPNAS ADHQGGGVSA GYLPLVLIAA AAGVLLARAA RTRQARLGGL VGFMVAAGVA GTLALGGGLD VLPDTFGSSV VVLAMVAGAV VAPVLGLGAV AGGRGLVAAV GVTVLGAALS GASSAPEMLP TPWGGLGQLL PPGAGVTLLR STLYFDGAGG GRGAAVLAIW AVAGIALILL GRERAGGAGT IPAGTSVPSE ATAAPAAAAV AAGLVVRPRE ATAETSPSVS PREGGFRA
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