| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4846 |
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| Symbol | |
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| ID | 5673187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5811722 |
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| End bp | 5812600 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641243702 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001509118 |
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| Protein GI | 158316610 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.145119 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCTCCA ACGCACCGCC GAACGCCCGG AAACCTGTGG GCCGGGTCCT CGTCGTCAGT
GGCGGGACAG ACGGGATGGG CCGCGCCCTC GCACTCGCTC GCGCCGATCG CGGCGACCAG
GTCGTCGCGA TCGGCAGCAA CCCGACAAAG GGCGAGGCGT TGCTGGCCGA GGCCGCCCGG
CGTGGCGTGG CCGGGCGAGT CCGCTTCGTC CGGGCTGACC TCGCGACTGT CGCGGGCAAC
CGCCGTGTCC TCGAAGACAC TCTCGGCCAG CACGACAGGA TCGACGTGCT GGCACTGTTC
GCCAACCGGC AAGCACCCAA ACGAACCCTG ACAGCGGACG GGCTCGAAAG CACCTTCGCG
CTCTACTACC TCAGCCGCTA CGTCCTCAGC CATGGCTTCC GCGACGCGCT GGAGGCCAGT
GACGCTCCGG TCATCGTGAA TGTCGCCGGC GTCGGCATCA CCAAGGGATC GATCCACTGG
GACGACCTCC AACTGGAACG TGGCTACAGC ATGATCGCCG CGCAGCTGCA AGCAGCCCGA
GCCAACGACC TACTCGGCGT CGCCTACACC GAGCACGCCA ACAGCAAGGC GCGCTATGTG
CTCTACCACC CCGGATTCAC CAGGAGCGGA GACCTCAGCC CCCTGCCCGC GGCGCTGCGC
GCCAGCATCC GGGCCGCCGC GAGGATCTCG GCGCGCCCCA TCGCCGAATC GATCGGCGCC
ATCCACCACT TCATTGATGC GCCCCCTGCC GCAGGGTTGA CCGCGATCGA TCGGAACAAG
CACCTACCGC TGACGCTCGA AACCCTGAAT CCGCAGAACG CGGAACGCCT CGCGCGAGCA
ACCGAAGCGC TGGTCGCCGC GCTACCCAGC ACCCCGTAG
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| Protein sequence | MFSNAPPNAR KPVGRVLVVS GGTDGMGRAL ALARADRGDQ VVAIGSNPTK GEALLAEAAR
RGVAGRVRFV RADLATVAGN RRVLEDTLGQ HDRIDVLALF ANRQAPKRTL TADGLESTFA
LYYLSRYVLS HGFRDALEAS DAPVIVNVAG VGITKGSIHW DDLQLERGYS MIAAQLQAAR
ANDLLGVAYT EHANSKARYV LYHPGFTRSG DLSPLPAALR ASIRAAARIS ARPIAESIGA
IHHFIDAPPA AGLTAIDRNK HLPLTLETLN PQNAERLARA TEALVAALPS TP
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