| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4840 |
|---|
| Symbol | |
|---|
| ID | 5673181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 5803125 |
|---|
| End bp | 5804375 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 641243696 |
|---|
| Product | oxidoreductase domain-containing protein |
|---|
| Protein accession | YP_001509112 |
|---|
| Protein GI | 158316604 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.364458 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0440629 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCCC CGCTGACGGG CGCACTGGGC GCGCAGCTGG TGCCTGTTCA GTCGCGGGTG
ACCCAGCCGC AGCTCCAGCC CCAGCCGCCG CAGTCGCCGC GGCCGGTTCG GCTGGCGCCG
CCGCGGCCCG CGACCGGCGC CGTCCGGGTC GCCGTCATCG GGCTGGGCTG GGCCGGCAGG
TCGATCTGGC TGCCCCGGCT GCGTGACCAC CCGCGGTTCG CGGTCGCCGC GGCGGTCGAC
CTCGACGCGG ACGCCCGCGC CGCGGTTGCG GCGGACGGCG TCGACGCCCC GCTGCTTGCC
AGCCCGGATC TGCTGAGCCC CGACGAGATC GACCTGGCGG TCGTCGCCGT GCCGAACCAC
CTGCACAGTG TGGTCGGCGG CCGGTTGCTC GCCGCGGGCC TGCCGGTCTT CCTGGAGAAG
CCGGTCTGCC TCAGCGGCGC GCAGGCGGAG GAACTGGCCC GTGCTGAGCG GGCAGGTGGG
GCGGTCCTGC TCGCGGGCAG CGCCGCTCGC TGCCGGGCGG ACGTCCGGGC GCTCTACACC
CTCGCGCGGG CCTGCGGGAT GATCCGGCAC GTCGATCTCG CCTGGGTACG TGCCCGGGGC
GTGCCCGACG CGGGCGGCTG GTTCACCGAC ACCACGCGCG CCGGGGGCGG GGCGCTGCTC
GACCTCGGCT GGCACCTGCT CGACACGGTC GCTCCACTGG TCGGGACGGC GGACTTCACC
CAGGTCGTAG GCACGGTCTC CGCGGACTTC GTCCGCAGCG GGGCGGGGGG AGCCACCTGG
CGCCATGCCG GCGGCCCCGG CTCGGGCCGG AGCGAAGCGG ACCGCGGCCG GCGCGGCGAC
GTCGAGGACA CGGCCCGGGG GTTCCTGGTC ACCGAACGCG GTGTGTCGGT GTCACTGCGG
GCGAGCTGGG CCTCCCACGA GGCGCTCGAC AGCACGGTGA TCAGAGTGGA GGGCAGCGCG
GGAACCGCCA CGCTGACCTG CACCTTCGGC TTCAGCCCGA ACCGGCGCGA CGGATCGGTG
CTGACGTACA CGCGGGACGG CGACACCGTC CGGGTGCCGG TGCCGTCCGA GCCGGTGGGC
GCCGAGTACC GGCGCCAGCT CGACGAGCTC CCGGCCCTGC TCGCCGACCC GGGAGCGCGG
GGACGCGCGG TCGCGGAGGC GCGGCGTGCC GTCGACGCTG TGGAGCGGTT CTACCGTTCG
GCGCGCCCGC CAGGTGCGGC GGCGGGCGAC CACCGGTCGG GACGGATCTG A
|
|---|
| Protein sequence | MSAPLTGALG AQLVPVQSRV TQPQLQPQPP QSPRPVRLAP PRPATGAVRV AVIGLGWAGR
SIWLPRLRDH PRFAVAAAVD LDADARAAVA ADGVDAPLLA SPDLLSPDEI DLAVVAVPNH
LHSVVGGRLL AAGLPVFLEK PVCLSGAQAE ELARAERAGG AVLLAGSAAR CRADVRALYT
LARACGMIRH VDLAWVRARG VPDAGGWFTD TTRAGGGALL DLGWHLLDTV APLVGTADFT
QVVGTVSADF VRSGAGGATW RHAGGPGSGR SEADRGRRGD VEDTARGFLV TERGVSVSLR
ASWASHEALD STVIRVEGSA GTATLTCTFG FSPNRRDGSV LTYTRDGDTV RVPVPSEPVG
AEYRRQLDEL PALLADPGAR GRAVAEARRA VDAVERFYRS ARPPGAAAGD HRSGRI
|
|---|
| |