| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4831 |
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| Symbol | |
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| ID | 5673172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5769777 |
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| End bp | 5771063 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641243687 |
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| Product | extracellular HAF |
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| Protein accession | YP_001509103 |
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| Protein GI | 158316595 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5563] Predicted integral membrane proteins containing uncharacterized repeats |
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| TIGRFAM ID | [TIGR02913] probable extracellular repeat, HAF family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0943414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0197145 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGGCGT ATCCGTTCAG GGCTGAACCA CCGGGGCGGC GGCCCCGCCG GCGGGCGCGG
CTCGTCCGCG CCACCGCGGC GGCCGTCGCG GCCGGTCTGC TCGGCAGCGC CGTGACCGCC
TCGCCGGCCC TCGCGGCCGC ACCGCCCGAG ACGGCCGCAC CGCCCGAGAC TGCGGCGGCC
TCCGAGACAG CCGCGGCGGC CGAGACGGCC GGTTCCCCGC GGGTGACCGT CACCGACGTG
GGAGCGCCGG ACCGGCTGGC CACGAACCTG TTCCCCGAGG ACCTCAACGA CGCAGGCGTC
GTCACGGGCT ACGGCCTGCT CGGCGGCCCG CAGCCCTTCC AGGCGTTCAC CTGGGCCGAC
GGCACGCTCA CCCTGCTGAA CGCGCCGAGC GCCGACCCGG GGGCGTTCAG CTTCCCGGTC
GCGCTGAACA ACCACGGCCA GGTCGTCGGC TTCACCACCG TCGGCGGGAC GGCGCACTCG
CTGCGCTGGG ACGGCGCGGA CCCGACCGAC ATCTCCGCCG CCGGCGGGAA CAGCCACCCG
CTCGCCGTCA ACGACGCCGG CCAGGTTCTG CTGACCGAGG GCGGCGCCGC GGCGCTGTGG
ACCGCCGGCA GCCGGGTCGC GGTCGCGCCG TTCCCGGTCA CGAACGCCGT GGGCCTCAAC
GGTTCGGGGC AGGTGTTCGG CACCGGCCGG GCCGCGGGCG CCGACGCCAC CGACCGCGCC
TTCGTCTGGA CGCCGACCGC GACCACCGAC ATCGGTCCGT TCGGGCTCAC CACCACCACG
ACCGACCTCA ACGACAGCGG CCAGCTGATC GGGTACGGCG CCTTGGCGCA GAGCCCCAAC
CGCACCCATT CCTTCGTCTG GACCCCCGCG CGGGCCGGCC GGCCGGCTGC CCTCACCGAC
CTGGGCACCC TGGCCAACCT GGAGACCGAG GCGCGCGACA TCAGCAACTC CGGCCACATC
GTCGGGCGCA GCGGCACCCG CTCCGGCTGG CACGCCGTGC GCTGGCAGGG CGGCCGTCTC
GTCGACCTCG GTGTCCTGCC CGGCGGGACG TCCAGCGAGG CGCTCGCCGT CAACGAGACC
GGACAGGCTG CCGGCTGGGG CATCGCTGGC GACGGGCGGC CACATGCCAT CCTCTGGAAA
AGGGACCGCC CGATCGACCT CGGGGTGCCC GCCGGTTTCA CCCAGAGCTT CGCAATAGAC
ATCAACGCCG CTGGCAGGGT GCTCGGCTAC GCGATCGACG AGACGGGCGG CGTCCACAGC
TTCGTCTGGA CGGTGACCGG CGGATGA
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| Protein sequence | MWAYPFRAEP PGRRPRRRAR LVRATAAAVA AGLLGSAVTA SPALAAAPPE TAAPPETAAA
SETAAAAETA GSPRVTVTDV GAPDRLATNL FPEDLNDAGV VTGYGLLGGP QPFQAFTWAD
GTLTLLNAPS ADPGAFSFPV ALNNHGQVVG FTTVGGTAHS LRWDGADPTD ISAAGGNSHP
LAVNDAGQVL LTEGGAAALW TAGSRVAVAP FPVTNAVGLN GSGQVFGTGR AAGADATDRA
FVWTPTATTD IGPFGLTTTT TDLNDSGQLI GYGALAQSPN RTHSFVWTPA RAGRPAALTD
LGTLANLETE ARDISNSGHI VGRSGTRSGW HAVRWQGGRL VDLGVLPGGT SSEALAVNET
GQAAGWGIAG DGRPHAILWK RDRPIDLGVP AGFTQSFAID INAAGRVLGY AIDETGGVHS
FVWTVTGG
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