Gene Franean1_4800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4800 
Symbol 
ID5673141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5731004 
End bp5731681 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content71% 
IMG OID641243656 
Productphosphoglycerate mutase 
Protein accessionYP_001509072 
Protein GI158316564 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.593362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAACGG ATCTGTTGTT CGCGCGGCAT GGCGAGGCGC ACTGCAATCT CAGACGTGTC 
GCGGGCGGCG AGATCGGCTG CACCGGACTG ACGGAACGCG GCCGTGACCA GGCGCGGCAG
CTCGGCAGAC GGCTTCGCCG AATGCACGAC GACCAGTCTT TCGACGCCGT CTACGTCTCG
TCGAGGCGCC GTGCCCGGGA GACCGCGGAA CTCGCCACCG GCGGGCTCGG CGTGCCGGTC
ACCGTCGAGC CGGCACTGGA GGGGCCGCAG CACGGCGTCG CGGACGGCCG GCCTTGGACG
GAGATCTGGG CCGCGTTCGG TGCCAGCCCC GGCGACGAGC CGGACCGGCC GTTCGCCGAG
GGCGCGGAAA GCTGGAACCA GTACCTCGCC AGGGCGATGG CAGCTCTGGG AGAGATCATC
GAACGACATC CGGAGCAGCG GGTGCTCGTC GTCGCGCACG CCGAGACCGT CGAGGCCGCC
CACACACGGT TCCTGCGGCT GCCGTCGCGC CCAGGGGTCG GTTTCGCCGT GGCGCACTGC
TCGATCACCT GGTGGTCACA CCGCGCGCCG GAGTTCGGGG CGGCACGCTG GCAGCTCGTC
AAGCACAACA GCACCCGACA CCTCGATCAG ATCGAGTCCG CCCATCTCAC ACCCGCGGCG
CGGGAATCCG GCCCCTGA
 
Protein sequence
MGTDLLFARH GEAHCNLRRV AGGEIGCTGL TERGRDQARQ LGRRLRRMHD DQSFDAVYVS 
SRRRARETAE LATGGLGVPV TVEPALEGPQ HGVADGRPWT EIWAAFGASP GDEPDRPFAE
GAESWNQYLA RAMAALGEII ERHPEQRVLV VAHAETVEAA HTRFLRLPSR PGVGFAVAHC
SITWWSHRAP EFGAARWQLV KHNSTRHLDQ IESAHLTPAA RESGP