Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4771 |
Symbol | |
ID | 5673113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 5697034 |
End bp | 5697882 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641243628 |
Product | putative transposase |
Protein accession | YP_001509044 |
Protein GI | 158316536 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3415] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.451842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCTAA CTGATAATCA ACGCAATATT CTCGAGTCCT TGGCTGGAGG TGGTGGGTAC GACAGGTCTG CGGCTGCCCG CGCCCGTATG GTGCTATGGC GGGACGAAGG ATTCTCAGTG CGGGAAATAG CCGAGAAGGC GGGCGCGTCG AAGCCTACCG TGCGACTGTG GCTGTCGCGC TATGACGAGG AGGGGCCGGA CGGCTTGCTG AGCCGGGTGT CCCCGGGGCG GCCACGGGAG GTCCCGGGGC GGGTACGGGC GCGGATCCTG GCGTTGACCA GGACCACTCC TCCACCGGAG ACCGGACTGA GCCACTGGAC GAGCACCGAG ATGGCGCGGT ACCTGAAGCG CCGCGAAGGA GTGTCGGTCT CGCACACCTT CGTGGCCCAG CTGTGGCGGG AGAACAATCT CCAGCCGCAC CGGCACCGAG TCTTCAAGCT CTCGGCGGAC CCGGATTTCG AGGCCAAGGT GGAGGACGTC GTCGGCCTCT ACCTTGATCC CCCCGAGGGC GCCGAGGTCC TGTCGATCGA CGAAAAGCCT GGGGTGCAGG CACGCGACCG GACGCAGCCA CCGCGGCCGG TCGCCACCGG CCGGGTCGCC ACCCGCACGC ACGACTACCA GCGGAAGGGC ACGACCGACC TGTTCGCCGC CCTCGACGTC GGGACGGGGC GGGTCACCGC CAGGTGCTTC CCCAGCCACA CCAGGGCCGA TTTCCTCACG TTCATGGACC AGGTCATCGC GGAATACGGC GGTGCGGAGC TCCATTGGAC AGCCACCGCA GAAGAGATCG TAGCCAAGGT GGAGGTACTC CACCGGGAAT TCAGGAAGCT GCTCACCAAC AACTTGTGA
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Protein sequence | MILTDNQRNI LESLAGGGGY DRSAAARARM VLWRDEGFSV REIAEKAGAS KPTVRLWLSR YDEEGPDGLL SRVSPGRPRE VPGRVRARIL ALTRTTPPPE TGLSHWTSTE MARYLKRREG VSVSHTFVAQ LWRENNLQPH RHRVFKLSAD PDFEAKVEDV VGLYLDPPEG AEVLSIDEKP GVQARDRTQP PRPVATGRVA TRTHDYQRKG TTDLFAALDV GTGRVTARCF PSHTRADFLT FMDQVIAEYG GAELHWTATA EEIVAKVEVL HREFRKLLTN NL
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