Gene Franean1_4739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4739 
Symbol 
ID5673081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5660080 
End bp5660631 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content72% 
IMG OID641243596 
Producthypothetical protein 
Protein accessionYP_001509012 
Protein GI158316504 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.861724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGA CCTCGGAGGT GGCCGCCCGG CCGGCCGTCC TGCCCGGCGC CGCCCGCCAG 
ATCGGCTACA TCGTCCGCGA CATCGATCAG GCCGTGCGCA GCTGGCTGGA GCTGGGAGTA
GGCCCCTGGT ACGTCCTGCG CGGACAGACG CAGACCGGCC TCTACCGGGG CCGGTCCTGC
ACGGCCCCGC TGTCCATCGC CTTCAGCAAC ACCGGTGACC TGCAGGTCGA ACTGATCTGC
CAGGAGGACG ACACCCCGAG CATCTACACG GAGTTCCTGC GCTCGGGGCA CGAGGGGTTC
CATCAGCTGG CCTGGTGGAC CGACGACTTC GACGCCACCA TGCGGTCCGT GGCGGCCGCC
GGGTGGCCCG TCGTGTGGTC CGGCGACGGC GACGGCGCGG CTCGCTACGC CTACGTCGAG
CCGCCGGCCG GGCCCGCGAC CATCGTCGAG ATCATGGAGG TCACGGCCGC CACGGACGGC
ATCGCCACGC TGGTCCGCCA GGCCGCGCAG GACTGGGACG GCAGCGATCC GATCCGCACG
CTCAGCGTGT AG
 
Protein sequence
MTPTSEVAAR PAVLPGAARQ IGYIVRDIDQ AVRSWLELGV GPWYVLRGQT QTGLYRGRSC 
TAPLSIAFSN TGDLQVELIC QEDDTPSIYT EFLRSGHEGF HQLAWWTDDF DATMRSVAAA
GWPVVWSGDG DGAARYAYVE PPAGPATIVE IMEVTAATDG IATLVRQAAQ DWDGSDPIRT
LSV