Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4715 |
Symbol | |
ID | 5673057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 5629405 |
End bp | 5629968 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641243572 |
Product | gamma-BHC dehydrochlorinase |
Protein accession | YP_001508988 |
Protein GI | 158316480 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.258333 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGGACA TCGCGGGTAC CGAGCAGGCG GCGATCCAGC AGCTGCTCGA CAAGCAGGCG ATCCGCGAGG CGACCATGCG GTACTGCCGG GGTGTGGACC GTTGCGATCC GGACCTCATC AGCTCCGCGT ACCACCCTGA TGCGATCGAC GATCACGGCG ACCAGCGCTA CTCGGGTAGA ACCGTAGGCC GAGGTGTCGC CGACCTCGTG CGCTCGGCGA AGGTCTCGAT GAACCAGGTC ACGAACCAGC TCATCACGCT GCACGATGAT AGGACGGCGG GTTGCGAGAC GTACTTCACG GTGTGGCGGA GCATCGAGAC CGAAGGTGAG GACCGCGTCC TCCTCGCGAT CGGGCGGTAC ATCGACCGCT TCGAACGCCG CGAGGGCGAA TGGAAGATCG CGCACCGGCT TGTGATTGTC GACCTGACAC ATGTCGTCCC GGCGAGCGGC CTGATGCGGC CGTCGCGGCC CGGTCTCGGT TCCCGCGACC GGAATGACCC TTCGTATGCG GCGCTTGAGA GCCCTGACAC CGGATGGACA CGCCCCCTGC CGGCACAGCC CTAG
|
Protein sequence | MRDIAGTEQA AIQQLLDKQA IREATMRYCR GVDRCDPDLI SSAYHPDAID DHGDQRYSGR TVGRGVADLV RSAKVSMNQV TNQLITLHDD RTAGCETYFT VWRSIETEGE DRVLLAIGRY IDRFERREGE WKIAHRLVIV DLTHVVPASG LMRPSRPGLG SRDRNDPSYA ALESPDTGWT RPLPAQP
|
| |