| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4694 |
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| Symbol | |
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| ID | 5673036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5607388 |
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| End bp | 5608956 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641243551 |
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| Product | spermidine synthase |
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| Protein accession | YP_001508967 |
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| Protein GI | 158316459 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4262] Predicted spermidine synthase with an N-terminal membrane domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGACGG ACACCCCCAG GGCCACATCG GCGGACAGCC CGCTGCCCGC CCGTACCCGC
CCACTCCTGC TCGCCGCGGT CGCGGTCTGC GCCGCCTGCG GCCTGGTGTA CGAGCTGGTC
CTGCTCACCC TGTCGACCAG CCTCGCCGGC GGCGGCATCA CCCAGACCTC ACTGATCGTC
GCCGGATTCG TCGCTGCCCT CGGCGCCGGG GCGCTGCTGG TCAAGCCCTT CCTCGGGCAC
GCGGCCGCCG CCTTCGTCGC CGTCGAGACC CTGCTCGGAA TCCTCGGCGG GCTCAGCGCC
GTCACTCTCT ACGTCACCTT CAGTTTCTAC GCGACGAGCG GACCGGTGCT CGTCCTCGGC
ACCGCGCTGC TCGGCACGCT GGTAGGCGCC GAGCTGCCGC TGCTTGTCAC GCTCCTGCAG
ACCGGCCGGA CCGACGTGGA CGCCCGGGCC AGCGGCCGGC TGCTCGCCGA CCTCAACGCA
GCCGACTACG CCGGCGCCCT CGTCGGCGGG CTGGTCTGGC CGTTCGTCCT GCTCCCCACG
GCCGGCATGA TCCGCGGAGC CGCGCTGACG GGGCTGGTCA ACCTGACAGC CGCGACCGTG
GTCGCCACGT TGCTGCTGCG GCGGTGGCTG ACCAGGCGTG CCCTCGTCAC CGCGCTCGGC
GCGCTCCTGG CCGCCGCCAC CCTGCTCGGC ACGCTGCTGC TCCGCGCACG TGACATCGAG
ACCGACGCCC GCCAGCGGCT GTACGCGGAC CCGATCGTGG TCGCCACCCG GTCCGCATAC
CAGGAGATCG TCGTGACCCG CCGAGTCGGC GACATGCGCC TCTACCTGGA CGGCGACCTG
CAGTTCTCCA GCGCCGACGA ACACCGGTAC ACCGAGGCGC TCGTCGCCCC CGCACTCGCC
CGTGATCCCG CCCGTGTCCT GGTCCTCGGC GGCGGCGACG GGTTGGCCGC GCGCGAGCTG
CTGCGCCACC CCACAGTCCG GCAGGTGGTG CAGGTGGAGC TGGACCCGCG GATGATCGAA
CTCGCCCGGA CGACCTTCGC CCGGCTCAAC CGTGCCGCGC TCAACGACCC GCGGGTGCGG
GTGGTGGTGG CCGACGCCTT CCGCTGGCTG CGCGACCCGC CGCCGGAGCC GTTCGACGCC
GTGGTCGTGG ACATGCCCGA TCCGGACACG CCGACGCTCG GCCGGCTCTA CTCGCAGGAG
TTCTACGGCC TGGTGCGGGC GGTCCTCGCG CCCGGAGGCC TGCTCACCGT GCAGGCCGGC
AGCCCGTACG CGACACCGAG TGCCTACTGG CGCACGGTGA GCACGGTCAG GGCCGCGGGC
CTGGCCACCA CGCCGTACCA CGTCGACGTC CCGAGCTTCG GGGACTGGGG CTTCGTGCTG
GCAACCACCG GGGGCACGCC TCCGCCGCTC GTGCTTTCCG AGCGGGCCAC CCCGGCCCGG
TTTCTCGACC AGGCCGTGCT CACCGCCGCC GGGGTCTTCC CGCTGGACCG GCCTCCGCGC
ACCCTCGAGC CCTCCACGCT CGACCGCCCA CGGATCGTCG ACGACCTGCG GACCGGCTAC
CAGCGTTAG
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| Protein sequence | MATDTPRATS ADSPLPARTR PLLLAAVAVC AACGLVYELV LLTLSTSLAG GGITQTSLIV
AGFVAALGAG ALLVKPFLGH AAAAFVAVET LLGILGGLSA VTLYVTFSFY ATSGPVLVLG
TALLGTLVGA ELPLLVTLLQ TGRTDVDARA SGRLLADLNA ADYAGALVGG LVWPFVLLPT
AGMIRGAALT GLVNLTAATV VATLLLRRWL TRRALVTALG ALLAAATLLG TLLLRARDIE
TDARQRLYAD PIVVATRSAY QEIVVTRRVG DMRLYLDGDL QFSSADEHRY TEALVAPALA
RDPARVLVLG GGDGLAAREL LRHPTVRQVV QVELDPRMIE LARTTFARLN RAALNDPRVR
VVVADAFRWL RDPPPEPFDA VVVDMPDPDT PTLGRLYSQE FYGLVRAVLA PGGLLTVQAG
SPYATPSAYW RTVSTVRAAG LATTPYHVDV PSFGDWGFVL ATTGGTPPPL VLSERATPAR
FLDQAVLTAA GVFPLDRPPR TLEPSTLDRP RIVDDLRTGY QR
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