| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4668 |
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| Symbol | |
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| ID | 5673010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5572543 |
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| End bp | 5574324 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641243525 |
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| Product | ABC transporter related |
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| Protein accession | YP_001508941 |
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| Protein GI | 158316433 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.206506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.270738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGTA GGCCCGCGCA GAACCGCGGG TCTGCGGGGG GCAGAGCGCA CGCCCTGCGC
ACGCTGCTCG GCCACGCCGG CGACGGCCGA CGGCTGCTCG TCGGCGGCTA CGCGCTCATC
CTCGTCGACG CGGTCGCGCA GAGTCTCACG CCCGCGGTGT TCCGGGTCGT GCTGGACCGC
ATCCAGCAGG ACCCGCACCG GTTCCTGCAC GACGGCTGGC AGGGGCCCGT GGTCGCCGCG
GTCGCCGTCT CCGCGACGTT CCTCGTGGCG GCCTACTTCG CCCACACCTG GTGCCGTCGG
GGTGCGACGC GATGGGCGAA CAACCTGCGA CGGGCCCTGT ACGAGCACGT CCAACGACTG
TCGATGGACT TCTTCCACCG GTCGCGGGTC GGCGATGTCG CCGCCGCGAT CAACCAGGAC
ATCGAACGCC TCGAGGTGAC GGTCTGGCAG GGCCTGTCGG TGTGGTGGGC GCTGGCGGTC
CTGCTCATCT CGGTGGGCCT CGTCGCCTGG GTCGACGCCT GGATGGCCCT GATCTCGCTC
GCCCTGCTCG CGGTGGCCGT CGGGTGGACG CTGCTGGTGC TCCCACGGCT TCGCCGCCAC
AGCCGCGACA TCCGCGACGA GCTCGGCCGC ACCTCCGGAA CCCTCGCCGA GATGCTCGGC
GTGAACACCC TTCTCAAGGC GTTCAACGCG GAGGACGATG CCCTGCGCCA GGTCCGGGGC
GGTACCGACC GGGTGCGGGC CGGGTCCGAG GCCCTGGCGC GGCTCCAGCA CCGCTACGCC
GACCCGCTCG GCTTCCACCT CTCGTTCGTC GCCCCGTTCC TGCTCCTGTT CGTCGGCGCG
TGGCGGGCCG CGTCGGGGAC GCTGTCCATC GGCGACGTCG TCGCCGTCTG GGGCTTCTGG
CTGCGCGGGT CGAGCTCGCT CACCGTCGTC ATGACCAGCC TCCCCGAGGT GCTGGCCGGC
CTGGCCGCGA GCGAACGCGC CGCGAAGCTG TTCGAGGAGC GACCCGCGGT GAGTGATCTC
CCGCGGGCCC CGGCGCTGGT TGTCGCCCGC GGCGGCATCG TCTTCGAGCG GGTCTCGTTC
GCCTACCCCG GACGGCGGTC GCACCTGGTG CTCGACGGCT TCGACCTGAC GATCGCCCCG
GGGCGCAGCG TCGCGCTCGT CGGCTCCTCC GGCGCCGGCA AGTCCACCGT CGCGCAGCTG
CTGCTCCGGC TGTTCGACCC GGCCGCGGGC CGGGTGACGA TCGACGGCCA GGACCTCCGT
GCGGTCACGC AGGCCTCGGT GCGTGCGGCG GTGGGGGTGG TCTTCCAGGA GTCGGTACTG
ATCAGCGGCT CACTGGCACG CAATCTGCGG CTCGCCCAGC CGACCGCCAC CGACCAGGAC
ATCGAGGCGG CGCTGCGGGC GGCGAACGCG TGGGAGTTCG TCCGCGCCTG GGAGGAGGGC
ATTCACACGG AGCTCGGCGA ACGCGGCGCC ATGCTCTCCG GGGGGCAGCG CCAGCGCCTC
GCCATCGCCC GGGTGATGCT GAAGGATCCC CCCATCGTCG TGCTCGACGA GGCGACCAGC
GCGCTCGACG CCGGCAGCGA ACGGCTCGTG CTCGACGCCC TGGACCGGCT CCTGTCCGGG
CGGACGTCCC TGATCATCGC CCACCGGATC GCCACCGTCC GCCACTGCGA CCAGATCGTC
GTGATGGAGC GCGGCCGGGT CGCTGACGCC GGCACGCACT CCTCACTGCT CCAGTCCTCG
GCGACGTACC GCTCGTACTG CCGCGAGCAG TCGGTGGCCT GA
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| Protein sequence | MTGRPAQNRG SAGGRAHALR TLLGHAGDGR RLLVGGYALI LVDAVAQSLT PAVFRVVLDR
IQQDPHRFLH DGWQGPVVAA VAVSATFLVA AYFAHTWCRR GATRWANNLR RALYEHVQRL
SMDFFHRSRV GDVAAAINQD IERLEVTVWQ GLSVWWALAV LLISVGLVAW VDAWMALISL
ALLAVAVGWT LLVLPRLRRH SRDIRDELGR TSGTLAEMLG VNTLLKAFNA EDDALRQVRG
GTDRVRAGSE ALARLQHRYA DPLGFHLSFV APFLLLFVGA WRAASGTLSI GDVVAVWGFW
LRGSSSLTVV MTSLPEVLAG LAASERAAKL FEERPAVSDL PRAPALVVAR GGIVFERVSF
AYPGRRSHLV LDGFDLTIAP GRSVALVGSS GAGKSTVAQL LLRLFDPAAG RVTIDGQDLR
AVTQASVRAA VGVVFQESVL ISGSLARNLR LAQPTATDQD IEAALRAANA WEFVRAWEEG
IHTELGERGA MLSGGQRQRL AIARVMLKDP PIVVLDEATS ALDAGSERLV LDALDRLLSG
RTSLIIAHRI ATVRHCDQIV VMERGRVADA GTHSSLLQSS ATYRSYCREQ SVA
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