Gene Franean1_4597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4597 
Symbol 
ID5672942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5478094 
End bp5478894 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content69% 
IMG OID641243458 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001508874 
Protein GI158316366 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.937217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACCAT CCGTGCTGCT GGAGCAGCGG GGCGCGGTGT CGATCGTGAC GCTGCACCGG 
CCCGGCCGCC GCAACGGCGT GACCGTTCAG ATGTGCGAAG AGCTCTATGA AGCGCTATCC
CCCGTGCCGG CCAGTGATGC ACGCGTCGTT GTGCTGCGTG GCGCGGGCAA CGACTTCTCG
GTCGGCGCTG ATCTCACCGG CGGCCACTCG TCGGAACCGG TGACGCTGGA ACGGCTCGGC
GCCGTGTACC ACGCGTCGAC ATTGCTGCAC ACGATGCCGC AGCTGACGAT CGCCGCGATC
GACGGTGGCT GCGCGGGCGC GGCGATGGGA TGGGCGTGCG CGTGCGACTT CCGGTTCGCG
TCCGAACGCG CCAGGTTCGC GACCGGTTTC CTGAAAGTCG GCGTGTCCGG AGACATGGGT
CTCGTCTGGT CGCTTGCGCG GCTCGTCGGC GCGGCCCGTG CTCGCGAGCT GCTGTTCTTT
CCGGAGAAGG TGACGGCGCA GGACGCGCTC GCCTTCGGCC TCGTCACCCG GCTGTTCCCG
GCCGACACGC TGCACGACGA GGTGCTCGCG CTGGCCGACG AGCTCGCGGG CCACCATCCG
TTCCCGCTGC GGATGATGAA GGCCAACGTG CTGTCTGCCG AGCGGATGGA CATGGCGGAG
TACATCGAGG TCGAGTCGGC GCGCCACCTG CACGTCACGG CGAGCCCGTC GTTGCTGCCG
GCACGATCAT CTCAGTCGGG AACCGGAACC CGACGAACTC CGACTCAGGC GACGGCGGAC
GGGCCGCGAC GCGACTCGTG A
 
Protein sequence
MEPSVLLEQR GAVSIVTLHR PGRRNGVTVQ MCEELYEALS PVPASDARVV VLRGAGNDFS 
VGADLTGGHS SEPVTLERLG AVYHASTLLH TMPQLTIAAI DGGCAGAAMG WACACDFRFA
SERARFATGF LKVGVSGDMG LVWSLARLVG AARARELLFF PEKVTAQDAL AFGLVTRLFP
ADTLHDEVLA LADELAGHHP FPLRMMKANV LSAERMDMAE YIEVESARHL HVTASPSLLP
ARSSQSGTGT RRTPTQATAD GPRRDS