| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4592 |
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| Symbol | |
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| ID | 5672937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5473599 |
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| End bp | 5474459 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641243453 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508869 |
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| Protein GI | 158316361 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.338469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGACGCA TGGACGGCAA GGTCGTCTTC ATCACCGGTG CGGCGCGTGG CCAGGGGCGG
GCGCACGCCG TCCGGGTAGC GGCGGAGGGA GGCGACGTCG TGGCCGTCGA CCTGTGCGCC
GACATCGCCT CCACGCCCTA CCCGATGGCG ACCCGGGACG ACCTGGACGA GACGGCCCGC
CTGGTCAAGG AGCGCGGCGG CCGCGTCGTC GCGCAGGTCG CCGACGTCCG CGACCGGGCC
GCGCTGGCCG CCGCCGTCGC CGAGGGCATC GCCCAGTTCG GCCGGTTGGA CGGCGTGGTG
GCCCAGGCCG GTATCTGCCC GCTCGGTACG ACGGCGCCGC AGGCCTTCGT CGACGCGGTC
AGCGTCGACT TCGGTGGCGT CTTCAACGCC GTCGACGTCG CCCTGCCCCA CCTGCAGCCC
GGGGCCTCGA TCGTCGCGAC GGGAAGCCTG GCCGCGTTGA TCCCCGGCAC ATTGGACAAC
GCGGCCAAGG GGTCCGGCGG CCTGGGCTAC GCCTGGGCCA AGCGGGCGGT GGCGTCGCTG
GTCCACGACC TCGCCGTCGT CCTGGCTGGT CAGAGCATCC GGGTGAACGC CGTCCACCCG
ACCAACGTCA ACACCGACAT GCTGAACAAC GACGTCATGT ACCGGGCGTT CCGCCCGGAC
CTGGCCGAGC CCACCCTCGA GGACGTGCTG CCGTCGTTCC CGGCCATGAC CGCGACAGGC
GACCCGTACG TCGAGCCCGA GGACATCGCC GACGCGGTCC TCTTCCTGCT CTCCGACGAG
TCCCGCTTCA TCACCGGCAC CCAGCTCCGC GTCGACGCGG GAGGTTACGT CAGGCTGCGG
CCGCAGGTGC CCGCCTTCTG A
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| Protein sequence | MGRMDGKVVF ITGAARGQGR AHAVRVAAEG GDVVAVDLCA DIASTPYPMA TRDDLDETAR
LVKERGGRVV AQVADVRDRA ALAAAVAEGI AQFGRLDGVV AQAGICPLGT TAPQAFVDAV
SVDFGGVFNA VDVALPHLQP GASIVATGSL AALIPGTLDN AAKGSGGLGY AWAKRAVASL
VHDLAVVLAG QSIRVNAVHP TNVNTDMLNN DVMYRAFRPD LAEPTLEDVL PSFPAMTATG
DPYVEPEDIA DAVLFLLSDE SRFITGTQLR VDAGGYVRLR PQVPAF
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