Gene Franean1_4573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4573 
Symbol 
ID5672920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5455978 
End bp5456835 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content73% 
IMG OID641243436 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001508852 
Protein GI158316344 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.134607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.436736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGGCGT GCGGCGCACC TGGTGATGCT AATGCCAGAA CGATGTTCTC TATAGAGAAC 
CTGAGTAAGG AGCCTCCGCT GCCAGCATCA GCCCCCTCGG ACGACGTCCT GGTGCGCCGT
GAGGACGGGG TCCTCACGAT CACGATCAAC CGTCCCGACC AGCGCAACGC CGTGAACGGC
GAGGTCTCCC GCGGCATCGC GGCCGCGCTC GACCTGCTCG ACTCGACTCC CGAGCTGCAG
GTCGCGGTGC TGCACGGCGC CGGCCCGAGC TTCTGCGCGG GCATGGACCT CAAGGCGTTC
GCCGCCGGGG AGAAGACCTC GGACCCGGTG CGAGGCTTCG CCGGGCTGGT CGAACGGCCG
CCCGCGAAGC CGTTGATCGC GGCGGTCGAG GGGTGGGCGT TGGGCGGCGG TTTCGAGATC
GTCCTCGCGT GCGACCTGGT GGTGGCGGGC CGCGGGGCGC GGTTCGGGCT GCCGGAGGTC
CGTCGCGGCC TGGCCGCGCG CGGCGGCGGT GCCTTCCGCC TGCCGCGCCG GCTGCCGCAC
ATGCTCGCCA TGGAACTGCT CCTCACCGGC GCCCCGCTCG AGGCCGAGCG CGCGGCTCAC
TTCGGCCTGG TGAACCGGCT GGTCGACGAC GGCGGGGCGC TGGACGCCGC CCTGGCGCTC
GCGGGCGTGG TCGCCGAGAG CGCGCCGATG TCGGTGCGGG CGTCCAAGCA GGTCGCGGTG
GACTCCGCCG ACTGGCCGGT CAGCGAGGGT TTCGACCAGC AGCGGGCGCT GTTCGAACCG
GTGTTCGCCT CCAGCGACGC GGCCGAGGGC GTGGCCGCCT TCCGGGAGCG GCGCGCTCCG
GTCTGGCGCG ACGCATGA
 
Protein sequence
MTACGAPGDA NARTMFSIEN LSKEPPLPAS APSDDVLVRR EDGVLTITIN RPDQRNAVNG 
EVSRGIAAAL DLLDSTPELQ VAVLHGAGPS FCAGMDLKAF AAGEKTSDPV RGFAGLVERP
PAKPLIAAVE GWALGGGFEI VLACDLVVAG RGARFGLPEV RRGLAARGGG AFRLPRRLPH
MLAMELLLTG APLEAERAAH FGLVNRLVDD GGALDAALAL AGVVAESAPM SVRASKQVAV
DSADWPVSEG FDQQRALFEP VFASSDAAEG VAAFRERRAP VWRDA