Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4555 |
Symbol | |
ID | 5672902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 5434111 |
End bp | 5434908 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641243418 |
Product | regulatory protein GntR HTH |
Protein accession | YP_001508834 |
Protein GI | 158316326 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGGCT TGAGAAGCTC GACTGCGCAG GTCGGCATGA TCGTGCGCGC CCCGAAGACC GCTGAGATCA TCGCAACTCA CCTGCGAGGT CAGGTGGTGC GGGGCGAGTT GCGGACCGGG CAGACCCTGC CACCCGAGAC CCAGCTGATG GAGCAGTTCG GTGTATCGCG GCCGACCTTG CGCGAGGCGT TCCGCATCCT CGAGGCCGAG TCGCTCATCA GTGTCCGCCG GGGCAGCCGC GGCGGGGCGC AGGTGACCAC GCCGGACCTC TCGGTCGCCG CCCGAGCCGT CGGGCTGCAG CTGCAGATCC AGGGGACGAC GATCGACGAC GTCTACCAGG CCCGGATGGT CTCCGAGCCC GCCTGTGCGC GGCTGCTCGC GCAGCGGCGC GAGGACCAGG ACATCGCCGA TCTGACCGAG GTGGTCGAGG CGCTGAAGGC CGAGGTCGCC AAGCACGGGA CGTTCGTGCC GGACCCCGAC GTCTGGTCGT CGCTGACCTA CCGCTTCCAC GAACTGATCC TGCAGCGCTC GGGCAACAGA ACCCTGGCGG TCCAGGGCGC GGTCCTGCAG GACATCGTGG CGACGCACAT CCGCACGCGG GTCCAGCGCT ACGACGAGAA CGACACGCCG GAGCGCTTCC AGCGGGTGAT CCGCTCGTAC GAGAGGTTCA TCAGCCTGAT CCGGAACCGG AACGCCGACA TGGCGGAGCG GCACTGGCGC TCGCACATGG AGGCCGCGGC CCAGTACCTG CTCAAGGACG ACCTCAAGAA CAAGTCCGTC GTCGAGCTGT TCTCCTGA
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Protein sequence | MSGLRSSTAQ VGMIVRAPKT AEIIATHLRG QVVRGELRTG QTLPPETQLM EQFGVSRPTL REAFRILEAE SLISVRRGSR GGAQVTTPDL SVAARAVGLQ LQIQGTTIDD VYQARMVSEP ACARLLAQRR EDQDIADLTE VVEALKAEVA KHGTFVPDPD VWSSLTYRFH ELILQRSGNR TLAVQGAVLQ DIVATHIRTR VQRYDENDTP ERFQRVIRSY ERFISLIRNR NADMAERHWR SHMEAAAQYL LKDDLKNKSV VELFS
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