Gene Franean1_4470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4470 
Symbol 
ID5672821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5335729 
End bp5336280 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content72% 
IMG OID641243338 
ProductABC transporter related 
Protein accessionYP_001508754 
Protein GI158316246 
COG category[R] General function prediction only 
COG ID[COG3845] ABC-type uncharacterized transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACG CCGTCGCCAA CAGCTTCAGC CGACTTGCCG CGCGGGTCGT GGAGATCGGA 
CGCCAACCGC GGGCCCGATC CATGGATCTG CTGATCGCGG CCACCGCACA CGGCGCCGCC
TACCGCACGA ATCCCCCGGC CCGGCCGGCG CCTGGCGTCG CGCCGAGCGA GGTGCACGCC
CTCATCGGCG AGAACGGCGC GGGCAAGAGC ACGCTGCTGA AGCTGATCTA CGGTCTGTAC
CGGCCGGACT CCGGTGAACT GCGCATCGAC GGCTGCCGGG TCGCGGTGGG CTCACCCACC
CAGGCCCGCG CGCTGGGCAT CGGCATGGTC TTCCAGGACC TGCGGCTCGT ACCCGCGTTC
ACCGTCGCGG AGAACTTCGC GCTGGCGCTG CGCCGCTCAG GTTTCACGCT CGGTCTCGAC
GAGCTGCGGC GCCGTATCAC GGCGGCGAGC GAGGAGTACG GCCTCGCCGT CGATCCCCGG
GCCGTCGTGC GCCATCTCTC CATCGGCGAG CGCCAATGGA CCGAGCGGGT CTCCGCCGCG
GCAGGGCCGT GA
 
Protein sequence
MPDAVANSFS RLAARVVEIG RQPRARSMDL LIAATAHGAA YRTNPPARPA PGVAPSEVHA 
LIGENGAGKS TLLKLIYGLY RPDSGELRID GCRVAVGSPT QARALGIGMV FQDLRLVPAF
TVAENFALAL RRSGFTLGLD ELRRRITAAS EEYGLAVDPR AVVRHLSIGE RQWTERVSAA
AGP