Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4470 |
Symbol | |
ID | 5672821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 5335729 |
End bp | 5336280 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641243338 |
Product | ABC transporter related |
Protein accession | YP_001508754 |
Protein GI | 158316246 |
COG category | [R] General function prediction only |
COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGACG CCGTCGCCAA CAGCTTCAGC CGACTTGCCG CGCGGGTCGT GGAGATCGGA CGCCAACCGC GGGCCCGATC CATGGATCTG CTGATCGCGG CCACCGCACA CGGCGCCGCC TACCGCACGA ATCCCCCGGC CCGGCCGGCG CCTGGCGTCG CGCCGAGCGA GGTGCACGCC CTCATCGGCG AGAACGGCGC GGGCAAGAGC ACGCTGCTGA AGCTGATCTA CGGTCTGTAC CGGCCGGACT CCGGTGAACT GCGCATCGAC GGCTGCCGGG TCGCGGTGGG CTCACCCACC CAGGCCCGCG CGCTGGGCAT CGGCATGGTC TTCCAGGACC TGCGGCTCGT ACCCGCGTTC ACCGTCGCGG AGAACTTCGC GCTGGCGCTG CGCCGCTCAG GTTTCACGCT CGGTCTCGAC GAGCTGCGGC GCCGTATCAC GGCGGCGAGC GAGGAGTACG GCCTCGCCGT CGATCCCCGG GCCGTCGTGC GCCATCTCTC CATCGGCGAG CGCCAATGGA CCGAGCGGGT CTCCGCCGCG GCAGGGCCGT GA
|
Protein sequence | MPDAVANSFS RLAARVVEIG RQPRARSMDL LIAATAHGAA YRTNPPARPA PGVAPSEVHA LIGENGAGKS TLLKLIYGLY RPDSGELRID GCRVAVGSPT QARALGIGMV FQDLRLVPAF TVAENFALAL RRSGFTLGLD ELRRRITAAS EEYGLAVDPR AVVRHLSIGE RQWTERVSAA AGP
|
| |