Gene Franean1_4466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4466 
Symbol 
ID5672817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5332670 
End bp5332984 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content59% 
IMG OID641243334 
Productintegrase, catalytic region 
Protein accessionYP_001508750 
Protein GI158316242 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGCGAG GACCGGTTGA GTTCGGTAAC TATACGTCTA CCCAGTTCGC TGCTACGTTG 
AAGAACCTCG GGATCCGCCA GTCCGTCGGC CGGACCGGAA TTTGCTATGA CAATGCGATG
GCCGAGTCCT TCTTCGCAGC TCTCAAGAAC GAACGCGTCC ACCGCACCGC CTATCCCACC
CGAGAACACG CCCGACGCGA CATTGCCCGA TACATCGAAC TTCGCTACAA TACGACACGC
CGCCACTCGG GACTCGACTA CCGAACCCCG CAGCAGGTCC ACGACGAGTA CCTGAAAAGG
CAGACCGCCG CATAG
 
Protein sequence
MLRGPVEFGN YTSTQFAATL KNLGIRQSVG RTGICYDNAM AESFFAALKN ERVHRTAYPT 
REHARRDIAR YIELRYNTTR RHSGLDYRTP QQVHDEYLKR QTAA